{ "@context": "http://reg.genome.network/schema/allele.jsonld", "@id": "http://reg.genome.network/allele/CA401793443", "communityStandardTitle": [ "NM_000271.5(NPC1):c.2431C>T (p.Gln811Ter)" ], "externalRecords": { "COSMIC": [ { "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=5583864", "active": true, "id": "COSM5583864" }, { "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=5583865", "active": true, "id": "COSM5583865" } ], "ClinVarAlleles": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=3025037[alleleid]", "alleleId": 3025037, "preferredName": "NM_000271.5(NPC1):c.2431C>T (p.Gln811Ter)" } ], "ClinVarVariations": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/2858822", "RCV": [ "RCV003605389" ], "variationId": 2858822 } ], "MyVariantInfo_hg19": [ { "@id": "http://myvariant.info/v1/variant/chr18:g.21121115G>A?assembly=hg19", "id": "chr18:g.21121115G>A" } ], "MyVariantInfo_hg38": [ { "@id": "http://myvariant.info/v1/variant/chr18:g.23541151G>A?assembly=hg38", "id": "chr18:g.23541151G>A" } ], "dbSNP": [ { "@id": "http://www.ncbi.nlm.nih.gov/snp/2058707982", "rs": 2058707982 } ], "gnomAD_4": [ { "@id": "http://gnomad.broadinstitute.org/variant/18-23541151-G-A?dataset=gnomad_r4", "id": "18-23541151-G-A", "variant": "18:23541151 G / A" } ] }, "genomicAlleles": [ { "chromosome": "18", "coordinates": [ { "allele": "A", "end": 23541151, "referenceAllele": "G", "start": 23541150 } ], "hgvs": [ "NC_000018.10:g.23541151G>A", "CM000680.2:g.23541151G>A" ], "referenceGenome": "GRCh38", "referenceSequence": "http://reg.genome.network/refseq/RS000066" }, { "chromosome": "18", "coordinates": [ { "allele": "A", "end": 21121115, "referenceAllele": "G", "start": 21121114 } ], "hgvs": [ "NC_000018.9:g.21121115G>A", "CM000680.1:g.21121115G>A" ], "referenceGenome": "GRCh37", "referenceSequence": "http://reg.genome.network/refseq/RS000042" }, { "chromosome": "18", "coordinates": [ { "allele": "A", "end": 19375113, "referenceAllele": "G", "start": 19375112 } ], "hgvs": [ "NC_000018.8:g.19375113G>A" ], "referenceGenome": "NCBI36", "referenceSequence": "http://reg.genome.network/refseq/RS000018" }, { "coordinates": [ { "allele": "T", "end": 50467, "referenceAllele": "C", "start": 50466 } ], "hgvs": [ "NG_012795.1:g.50467C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS002534" } ], "transcriptAlleles": [ { "coordinates": [ { "allele": "T", "end": 2594, "referenceAllele": "C", "start": 2593 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "ENST00000269228.10:c.2431C>T" ], "proteinEffect": { "hgvs": "ENSP00000269228.4:p.Gln811Ter", "hgvsWellDefined": "ENSP00000269228.4:p.Gln811_Phe1278delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProSerValAsnLysAlaLysSerCysAlaThrGluGluArgTyrLysGlyThrGluArgGluArgLeuLeuAsnPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS743101", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000269228.10:c.2431C>T" }, "RefSeq": { "hgvs": "NM_000271.5:c.2431C>T" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000269228.4:p.Gln811Ter" }, "RefSeq": { "hgvs": "NP_000262.2:p.Gln811Ter" } } } }, { "coordinates": [ { "allele": "T", "end": 2986, "referenceAllele": "C", "start": 2985 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "ENST00000269228.9:c.2431C>T" ], "proteinEffect": { "hgvs": "ENSP00000269228.4:p.Gln811Ter", "hgvsWellDefined": "ENSP00000269228.4:p.Gln811_Phe1278delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProSerValAsnLysAlaLysSerCysAlaThrGluGluArgTyrLysGlyThrGluArgGluArgLeuLeuAsnPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS252154" }, { "coordinates": [ { "allele": "T", "end": 2345, "referenceAllele": "C", "start": 2344 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "ENST00000540608.5:n.2345C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS362492" }, { "coordinates": [ { "allele": "T", "end": 222, "referenceAllele": "C", "start": 221 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "ENST00000586718.1:n.222C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS389589" }, { "coordinates": [ { "allele": "T", "end": 1509, "referenceAllele": "C", "start": 1508 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "ENST00000591051.1:c.1509C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS392618" }, { "@id": "http://reg.genome.network/allele/PA2741813940", "coordinates": [ { "allele": "T", "end": 2705, "referenceAllele": "C", "start": 2704 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "NM_000271.4:c.2431C>T" ], "proteinEffect": { "hgvs": "NP_000262.2:p.Gln811Ter", "hgvsWellDefined": "NP_000262.2:p.Gln811_Phe1278delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProSerValAsnLysAlaLysSerCysAlaThrGluGluArgTyrLysGlyThrGluArgGluArgLeuLeuAsnPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS006333" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_005258277.1:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_005258334.1:p.Gln828Ter", "hgvsWellDefined": "XP_005258334.1:p.Gln828_Cys1303delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAlaLysLeuLeuGluArgThrIleTyrLeuCysIleSerGlnHisIleHisTyrAlaThrGlnMetAlaProLeuGlnCysLeuMetThrAlaSerAspArgCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS062018" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_005258278.3:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_005258335.1:p.Gln828Ter", "hgvsWellDefined": "XP_005258335.1:p.Gln828_Phe1295delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProSerValAsnLysAlaLysSerCysAlaThrGluGluArgTyrLysGlyThrGluArgGluArgLeuLeuAsnPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS062019" }, { "coordinates": [ { "allele": "T", "end": 2594, "referenceAllele": "C", "start": 2593 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_005258279.1:c.2431C>T" ], "proteinEffect": { "hgvs": "XP_005258336.1:p.Gln811Ter", "hgvsWellDefined": "XP_005258336.1:p.Gln811_Cys1286delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAlaLysLeuLeuGluArgThrIleTyrLeuCysIleSerGlnHisIleHisTyrAlaThrGlnMetAlaProLeuGlnCysLeuMetThrAlaSerAspArgCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS062020" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_006722479.2:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_006722542.1:p.Gln828Ter", "hgvsWellDefined": "XP_006722542.1:p.Gln828_Ser1273delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProPheAsnSerTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS074580" }, { "coordinates": [ { "allele": "T", "end": 2893, "referenceAllele": "C", "start": 2892 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_011526015.1:c.2017C>T" ], "proteinEffect": { "hgvs": "XP_011524317.1:p.Gln673Ter", "hgvsWellDefined": "XP_011524317.1:p.Gln673_Cys1148delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAlaLysLeuLeuGluArgThrIleTyrLeuCysIleSerGlnHisIleHisTyrAlaThrGlnMetAlaProLeuGlnCysLeuMetThrAlaSerAspArgCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS093123" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_005258278.5:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_005258335.1:p.Gln828Ter", "hgvsWellDefined": "XP_005258335.1:p.Gln828_Phe1295delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProSerValAsnLysAlaLysSerCysAlaThrGluGluArgTyrLysGlyThrGluArgGluArgLeuLeuAsnPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS534810" }, { "coordinates": [ { "allele": "T", "end": 2594, "referenceAllele": "C", "start": 2593 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_005258279.2:c.2431C>T" ], "proteinEffect": { "hgvs": "XP_005258336.1:p.Gln811Ter", "hgvsWellDefined": "XP_005258336.1:p.Gln811_Cys1286delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAlaLysLeuLeuGluArgThrIleTyrLeuCysIleSerGlnHisIleHisTyrAlaThrGlnMetAlaProLeuGlnCysLeuMetThrAlaSerAspArgCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS534811" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_006722479.3:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_006722542.1:p.Gln828Ter", "hgvsWellDefined": "XP_006722542.1:p.Gln828_Ser1273delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProPheAsnSerTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS540548" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_017025784.1:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_016881273.1:p.Gln828Ter", "hgvsWellDefined": "XP_016881273.1:p.Gln828_Gly1281delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAspAspLeuLysValProValLeuGlnSerGluThrGlyTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS576072" }, { "coordinates": [ { "allele": "T", "end": 2645, "referenceAllele": "C", "start": 2644 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_017025785.1:c.2482C>T" ], "proteinEffect": { "hgvs": "XP_016881274.1:p.Gln828Ter", "hgvsWellDefined": "XP_016881274.1:p.Gln828_Phe1273delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAlaThrSerLeuPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS576073" }, { "coordinates": [ { "allele": "T", "end": 2594, "referenceAllele": "C", "start": 2593 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_017025786.1:c.2431C>T" ], "proteinEffect": { "hgvs": "XP_016881275.1:p.Gln811Ter", "hgvsWellDefined": "XP_016881275.1:p.Gln811_Gly1264delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleAspAspLeuLysValProValLeuGlnSerGluThrGlyTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS576074" }, { "coordinates": [ { "allele": "T", "end": 2594, "referenceAllele": "C", "start": 2593 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "XM_017025787.1:c.2431C>T" ], "proteinEffect": { "hgvs": "XP_016881276.1:p.Gln811Ter", "hgvsWellDefined": "XP_016881276.1:p.Gln811_Ser1256delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProPheAsnSerTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS576075" }, { "@id": "http://reg.genome.network/allele/PA2741813940", "coordinates": [ { "allele": "T", "end": 2594, "referenceAllele": "C", "start": 2593 } ], "gene": "http://reg.genome.network/gene/GN007897", "geneNCBI_id": 4864, "geneSymbol": "NPC1", "hgvs": [ "NM_000271.5:c.2431C>T" ], "proteinEffect": { "hgvs": "NP_000262.2:p.Gln811Ter", "hgvsWellDefined": "NP_000262.2:p.Gln811_Phe1278delinsAlaSerGluSerCysLeuPheArgPhePheLysAsnSerTyrSerProLeuLeuLeuLysAspTrpMetArgProIleValIleAlaIlePheValGlyValLeuSerPheSerIleAlaValLeuAsnLysValAspIleGlyLeuAspGlnSerLeuSerMetProAspAspSerTyrMetValAspTyrPheLysSerIleSerGlnTyrLeuHisAlaGlyProProValTyrPheValLeuGluGluGlyHisAspTyrThrSerSerLysGlyGlnAsnMetValCysGlyGlyMetGlyCysAsnAsnAspSerLeuValGlnGlnIlePheAsnAlaAlaGlnLeuAspAsnTyrThrArgIleGlyPheAlaProSerSerTrpIleAspAspTyrPheAspTrpValLysProGlnSerSerCysCysArgValAspAsnIleThrAspGlnPheCysAsnAlaSerValValAspProAlaCysValArgCysArgProLeuThrProGluGlyLysGlnArgProGlnGlyGlyAspPheMetArgPheLeuProMetPheLeuSerAspAsnProAsnProLysCysGlyLysGlyGlyHisAlaAlaTyrSerSerAlaValAsnIleLeuLeuGlyHisGlyThrArgValGlyAlaThrTyrPheMetThrTyrHisThrValLeuGlnThrSerAlaAspPheIleAspAlaLeuLysLysAlaArgLeuIleAlaSerAsnValThrGluThrMetGlyIleAsnGlySerAlaTyrArgValPheProTyrSerValPheTyrValPheTyrGluGlnTyrLeuThrIleIleAspAspThrIlePheAsnLeuGlyValSerLeuGlyAlaIlePheLeuValThrMetValLeuLeuGlyCysGluLeuTrpSerAlaValIleMetCysAlaThrIleAlaMetValLeuValAsnMetPheGlyValMetTrpLeuTrpGlyIleSerLeuAsnAlaValSerLeuValAsnLeuValMetSerCysGlyIleSerValGluPheCysSerHisIleThrArgAlaPheThrValSerMetLysGlySerArgValGluArgAlaGluGluAlaLeuAlaHisMetGlySerSerValPheSerGlyIleThrLeuThrLysPheGlyGlyIleValValLeuAlaPheAlaLysSerGlnIlePheGlnIlePheTyrPheArgMetTyrLeuAlaMetValLeuLeuGlyAlaThrHisGlyLeuIlePheLeuProValLeuLeuSerTyrIleGlyProSerValAsnLysAlaLysSerCysAlaThrGluGluArgTyrLysGlyThrGluArgGluArgLeuLeuAsnPheTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS662377", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000269228.10:c.2431C>T" }, "RefSeq": { "hgvs": "NM_000271.5:c.2431C>T" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000269228.4:p.Gln811Ter" }, "RefSeq": { "hgvs": "NP_000262.2:p.Gln811Ter" } } } } ], "type": "nucleotide" }