{ "@context": "http://reg.genome.network/schema/allele.jsonld", "@id": "http://reg.genome.network/allele/CA401363637", "communityStandardTitle": [ "NM_000152.5(GAA):c.836G>A (p.Trp279Ter)" ], "externalRecords": { "ClinVarAlleles": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=917275[alleleid]", "alleleId": 917275, "preferredName": "NM_000152.5(GAA):c.836G>A (p.Trp279Ter)" } ], "ClinVarVariations": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/928706", "RCV": [ "RCV001193013" ], "variationId": 928706 } ], "MyVariantInfo_hg19": [ { "@id": "http://myvariant.info/v1/variant/chr17:g.78081499G>A?assembly=hg19", "id": "chr17:g.78081499G>A" } ], "MyVariantInfo_hg38": [ { "@id": "http://myvariant.info/v1/variant/chr17:g.80107700G>A?assembly=hg38", "id": "chr17:g.80107700G>A" } ], "dbSNP": [ { "@id": "http://www.ncbi.nlm.nih.gov/snp/2039122730", "rs": 2039122730 } ] }, "genomicAlleles": [ { "chromosome": "17", "coordinates": [ { "allele": "A", "end": 80107700, "referenceAllele": "G", "start": 80107699 } ], "hgvs": [ "NC_000017.11:g.80107700G>A", "CM000679.2:g.80107700G>A" ], "referenceGenome": "GRCh38", "referenceSequence": "http://reg.genome.network/refseq/RS000065" }, { "chromosome": "17", "coordinates": [ { "allele": "A", "end": 78081499, "referenceAllele": "G", "start": 78081498 } ], "hgvs": [ "NC_000017.10:g.78081499G>A", "CM000679.1:g.78081499G>A" ], "referenceGenome": "GRCh37", "referenceSequence": "http://reg.genome.network/refseq/RS000041" }, { "chromosome": "17", "coordinates": [ { "allele": "A", "end": 75696094, "referenceAllele": "G", "start": 75696093 } ], "hgvs": [ "NC_000017.9:g.75696094G>A" ], "referenceGenome": "NCBI36", "referenceSequence": "http://reg.genome.network/refseq/RS000017" }, { "coordinates": [ { "allele": "A", "end": 11145, "referenceAllele": "G", "start": 11144 } ], "hgvs": [ "NG_009822.1:g.11145G>A", "LRG_673:g.11145G>A" ], "referenceSequence": "http://reg.genome.network/refseq/RS001659" } ], "transcriptAlleles": [ { "coordinates": [ { "allele": "A", "end": 961, "referenceAllele": "G", "start": 960 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000570803.6:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000460543.2:p.Trp279Ter", "hgvsWellDefined": "ENSP00000460543.2:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS914319" }, { "coordinates": [ { "allele": "A", "end": 991, "referenceAllele": "G", "start": 990 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000572080.2:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000459972.2:p.Trp279Ter", "hgvsWellDefined": "ENSP00000459972.2:p.Trp279_Ala630delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProAlaTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS914321" }, { "coordinates": [ { "allele": "A", "end": 1033, "referenceAllele": "G", "start": 1032 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000577106.6:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000458306.2:p.Trp279Ter", "hgvsWellDefined": "ENSP00000458306.2:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS914323" }, { "coordinates": [ { "allele": "A", "end": 1178, "referenceAllele": "G", "start": 1177 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000302262.8:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000305692.3:p.Trp279Ter", "hgvsWellDefined": "ENSP00000305692.3:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS744924", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000302262.8:c.836G>A" }, "RefSeq": { "hgvs": "NM_000152.5:c.836G>A" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000305692.3:p.Trp279Ter" }, "RefSeq": { "hgvs": "NP_000143.2:p.Trp279Ter" } } } }, { "coordinates": [ { "allele": "A", "end": 1055, "referenceAllele": "G", "start": 1054 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000302262.7:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000305692.3:p.Trp279Ter", "hgvsWellDefined": "ENSP00000305692.3:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS255143" }, { "coordinates": [ { "allele": "A", "end": 980, "referenceAllele": "G", "start": 979 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000390015.7:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000374665.3:p.Trp279Ter", "hgvsWellDefined": "ENSP00000374665.3:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS274344" }, { "coordinates": [ { "allele": "A", "end": 938, "referenceAllele": "G", "start": 937 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "ENST00000570803.5:c.836G>A" ], "proteinEffect": { "hgvs": "ENSP00000460543.1:p.Trp279Ter", "hgvsWellDefined": "ENSP00000460543.1:p.Trp279_Pro285del" }, "referenceSequence": "http://reg.genome.network/refseq/RS382243" }, { "@id": "http://reg.genome.network/allele/PA2825065312", "coordinates": [ { "allele": "A", "end": 1203, "referenceAllele": "G", "start": 1202 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_000152.3:c.836G>A", "LRG_673t1:c.836G>A" ], "proteinEffect": { "hgvs": "NP_000143.2:p.Trp279Ter", "hgvsWellDefined": "NP_000143.2:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS006214" }, { "@id": "http://reg.genome.network/allele/PA2825460627", "coordinates": [ { "allele": "A", "end": 1018, "referenceAllele": "G", "start": 1017 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_001079803.1:c.836G>A" ], "proteinEffect": { "hgvs": "NP_001073271.1:p.Trp279Ter", "hgvsWellDefined": "NP_001073271.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS010088" }, { "@id": "http://reg.genome.network/allele/PA1139670763", "coordinates": [ { "allele": "A", "end": 938, "referenceAllele": "G", "start": 937 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_001079804.1:c.836G>A" ], "proteinEffect": { "hgvs": "NP_001073272.1:p.Trp279Ter", "hgvsWellDefined": "NP_001073272.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS010089" }, { "coordinates": [ { "allele": "A", "end": 1049, "referenceAllele": "G", "start": 1048 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "XM_005257193.1:c.836G>A" ], "proteinEffect": { "hgvs": "XP_005257250.1:p.Trp279Ter", "hgvsWellDefined": "XP_005257250.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS061613" }, { "coordinates": [ { "allele": "A", "end": 1078, "referenceAllele": "G", "start": 1077 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "XM_005257194.3:c.836G>A" ], "proteinEffect": { "hgvs": "XP_005257251.1:p.Trp279Ter", "hgvsWellDefined": "XP_005257251.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS061614" }, { "@id": "http://reg.genome.network/allele/PA2825065312", "coordinates": [ { "allele": "A", "end": 1233, "referenceAllele": "G", "start": 1232 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_000152.4:c.836G>A" ], "proteinEffect": { "hgvs": "NP_000143.2:p.Trp279Ter", "hgvsWellDefined": "NP_000143.2:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS510756" }, { "@id": "http://reg.genome.network/allele/PA2825460627", "coordinates": [ { "allele": "A", "end": 1048, "referenceAllele": "G", "start": 1047 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_001079803.2:c.836G>A" ], "proteinEffect": { "hgvs": "NP_001073271.1:p.Trp279Ter", "hgvsWellDefined": "NP_001073271.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS511218" }, { "@id": "http://reg.genome.network/allele/PA1139670763", "coordinates": [ { "allele": "A", "end": 968, "referenceAllele": "G", "start": 967 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_001079804.2:c.836G>A" ], "proteinEffect": { "hgvs": "NP_001073272.1:p.Trp279Ter", "hgvsWellDefined": "NP_001073272.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS511219" }, { "coordinates": [ { "allele": "A", "end": 1034, "referenceAllele": "G", "start": 1033 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "XM_005257193.2:c.836G>A" ], "proteinEffect": { "hgvs": "XP_005257250.1:p.Trp279Ter", "hgvsWellDefined": "XP_005257250.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS534619" }, { "coordinates": [ { "allele": "A", "end": 1074, "referenceAllele": "G", "start": 1073 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "XM_005257194.4:c.836G>A" ], "proteinEffect": { "hgvs": "XP_005257251.1:p.Trp279Ter", "hgvsWellDefined": "XP_005257251.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS534620" }, { "@id": "http://reg.genome.network/allele/PA2825065312", "coordinates": [ { "allele": "A", "end": 1178, "referenceAllele": "G", "start": 1177 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_000152.5:c.836G>A" ], "proteinEffect": { "hgvs": "NP_000143.2:p.Trp279Ter", "hgvsWellDefined": "NP_000143.2:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS662328", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000302262.8:c.836G>A" }, "RefSeq": { "hgvs": "NM_000152.5:c.836G>A" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000305692.3:p.Trp279Ter" }, "RefSeq": { "hgvs": "NP_000143.2:p.Trp279Ter" } } } }, { "@id": "http://reg.genome.network/allele/PA2825460627", "coordinates": [ { "allele": "A", "end": 993, "referenceAllele": "G", "start": 992 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_001079803.3:c.836G>A" ], "proteinEffect": { "hgvs": "NP_001073271.1:p.Trp279Ter", "hgvsWellDefined": "NP_001073271.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS676219" }, { "@id": "http://reg.genome.network/allele/PA1139670763", "coordinates": [ { "allele": "A", "end": 913, "referenceAllele": "G", "start": 912 } ], "gene": "http://reg.genome.network/gene/GN004065", "geneNCBI_id": 2548, "geneSymbol": "GAA", "hgvs": [ "NM_001079804.3:c.836G>A" ], "proteinEffect": { "hgvs": "NP_001073272.1:p.Trp279Ter", "hgvsWellDefined": "NP_001073272.1:p.Trp279_Cys952delinsAsnArgAspLeuAlaProThrProGlyAlaAsnLeuTyrGlySerHisProPheTyrLeuAlaLeuGluAspGlyGlySerAlaHisGlyValPheLeuLeuAsnSerAsnAlaMetAspValValLeuGlnProSerProAlaLeuSerTrpArgSerThrGlyGlyIleLeuAspValTyrIlePheLeuGlyProGluProLysSerValValGlnGlnTyrLeuAspValValGlyTyrProPheMetProProTyrTrpGlyLeuGlyPheHisLeuCysArgTrpGlyTyrSerSerThrAlaIleThrArgGlnValValGluAsnMetThrArgAlaHisPheProLeuAspValGlnTrpAsnAspLeuAspTyrMetAspSerArgArgAspPheThrPheAsnLysAspGlyPheArgAspPheProAlaMetValGlnGluLeuHisGlnGlyGlyArgArgTyrMetMetIleValAspProAlaIleSerSerSerGlyProAlaGlySerTyrArgProTyrAspGluGlyLeuArgArgGlyValPheIleThrAsnGluThrGlyGlnProLeuIleGlyLysValTrpProGlySerThrAlaPheProAspPheThrAsnProThrAlaLeuAlaTrpTrpGluAspMetValAlaGluPheHisAspGlnValProPheAspGlyMetTrpIleAspMetAsnGluProSerAsnPheIleArgGlySerGluAspGlyCysProAsnAsnGluLeuGluAsnProProTyrValProGlyValValGlyGlyThrLeuGlnAlaAlaThrIleCysAlaSerSerHisGlnPheLeuSerThrHisTyrAsnLeuHisAsnLeuTyrGlyLeuThrGluAlaIleAlaSerHisArgAlaLeuValLysAlaArgGlyThrArgProPheValIleSerArgSerThrPheAlaGlyHisGlyArgTyrAlaGlyHisTrpThrGlyAspValTrpSerSerTrpGluGlnLeuAlaSerSerValProGluIleLeuGlnPheAsnLeuLeuGlyValProLeuValGlyAlaAspValCysGlyPheLeuGlyAsnThrSerGluGluLeuCysValArgTrpThrGlnLeuGlyAlaPheTyrProPheMetArgAsnHisAsnSerLeuLeuSerLeuProGlnGluProTyrSerPheSerGluProAlaGlnGlnAlaMetArgLysAlaLeuThrLeuArgTyrAlaLeuLeuProHisLeuTyrThrLeuPheHisGlnAlaHisValAlaGlyGluThrValAlaArgProLeuPheLeuGluPheProLysAspSerSerThrTrpThrValAspHisGlnLeuLeuTrpGlyGluAlaLeuLeuIleThrProValLeuGlnAlaGlyLysAlaGluValThrGlyTyrPheProLeuGlyThrTrpTyrAspLeuGlnThrValProValGluAlaLeuGlySerLeuProProProProAlaAlaProArgGluProAlaIleHisSerGluGlyGlnTrpValThrLeuProAlaProLeuAspThrIleAsnValHisLeuArgAlaGlyTyrIleIleProLeuGlnGlyProGlyLeuThrThrThrGluSerArgGlnGlnProMetAlaLeuAlaValAlaLeuThrLysGlyGlyGluAlaArgGlyGluLeuPheTrpAspAspGlyGluSerLeuGluValLeuGluArgGlyAlaTyrThrGlnValIlePheLeuAlaArgAsnAsnThrIleValAsnGluLeuValArgValThrSerGluGlyAlaGlyLeuGlnLeuGlnLysValThrValLeuGlyValAlaThrAlaProGlnGlnValLeuSerAsnGlyValProValSerAsnPheThrTyrSerProAspThrLysValLeuAspIleCysValSerLeuLeuMetGlyGluGlnPheLeuValSerTrpCysTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS676220" } ], "type": "nucleotide" }