{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA400473885",
  "communityStandardTitle": [
    "NM_001321120.2(TBX4):c.749G>A (p.Arg250Gln)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=539179[alleleid]",
        "alleleId": 539179,
        "preferredName": "NM_001321120.2(TBX4):c.749G>A (p.Arg250Gln)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/548696",
        "RCV": [
          "RCV000664181",
          "RCV003718276"
        ],
        "variationId": 548696
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr17:g.59557288G>A?assembly=hg19",
        "id": "chr17:g.59557288G>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr17:g.61479927G>A?assembly=hg38",
        "id": "chr17:g.61479927G>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1555883469",
        "rs": 1555883469
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "A",
          "end": 61479927,
          "referenceAllele": "G",
          "start": 61479926
        }
      ],
      "hgvs": [
        "NC_000017.11:g.61479927G>A",
        "CM000679.2:g.61479927G>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000065"
    },
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "A",
          "end": 59557288,
          "referenceAllele": "G",
          "start": 59557287
        }
      ],
      "hgvs": [
        "NC_000017.10:g.59557288G>A",
        "CM000679.1:g.59557288G>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000041"
    },
    {
      "chromosome": "17",
      "coordinates": [
        {
          "allele": "A",
          "end": 56912070,
          "referenceAllele": "G",
          "start": 56912069
        }
      ],
      "hgvs": [
        "NC_000017.9:g.56912070G>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000017"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 28482,
          "referenceAllele": "G",
          "start": 28481
        }
      ],
      "hgvs": [
        "NG_008080.1:g.28482G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000825"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 776,
          "referenceAllele": "G",
          "start": 775
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000642491.1:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000495714.1:p.Arg250Gln",
        "hgvsWellDefined": "ENSP00000495714.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS766772"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 908,
          "referenceAllele": "G",
          "start": 907
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000644296.1:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000495986.1:p.Arg250Gln",
        "hgvsWellDefined": "ENSP00000495986.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS767748",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000644296.1:c.749G>A"
          },
          "RefSeq": {
            "hgvs": "NM_001321120.2:c.749G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000495986.1:p.Arg250Gln"
          },
          "RefSeq": {
            "hgvs": "NP_001308049.1:p.Arg250Gln"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 794,
          "referenceAllele": "G",
          "start": 793
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000240335.1:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000240335.1:p.Arg250Gln",
        "hgvsWellDefined": "ENSP00000240335.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS249133"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 912,
          "referenceAllele": "G",
          "start": 911
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000393853.8:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000377435.3:p.Arg250Gln",
        "hgvsWellDefined": "ENSP00000377435.3:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS275845"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 252,
          "referenceAllele": "G",
          "start": 251
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000586874.2:n.252G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS389700"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 279,
          "referenceAllele": "G",
          "start": 278
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000589449.5:n.279G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS391499"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 494,
          "referenceAllele": "G",
          "start": 493
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "ENST00000590174.5:n.494G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS392003"
    },
    {
      "@id": "http://reg.genome.network/allele/PA658830837",
      "coordinates": [
        {
          "allele": "A",
          "end": 794,
          "referenceAllele": "G",
          "start": 793
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "NM_018488.2:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_060958.2:p.Arg250Gln",
        "hgvsWellDefined": "NP_060958.2:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS035787"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 767,
          "referenceAllele": "G",
          "start": 766
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_005257835.3:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257892.2:p.Arg250Gln",
        "hgvsWellDefined": "XP_005257892.2:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS061863"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 913,
          "referenceAllele": "G",
          "start": 912
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_005257837.2:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005257894.1:p.Arg250Gln",
        "hgvsWellDefined": "XP_005257894.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS061864"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 995,
          "referenceAllele": "G",
          "start": 994
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525490.1:c.938G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523792.1:p.Arg313Gln",
        "hgvsWellDefined": "XP_011523792.1:p.Arg313Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS092609"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 995,
          "referenceAllele": "G",
          "start": 994
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525491.1:c.938G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523793.1:p.Arg313Gln",
        "hgvsWellDefined": "XP_011523793.1:p.Arg313Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS092610"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 773,
          "referenceAllele": "G",
          "start": 772
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525492.1:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523794.1:p.Arg250Gln",
        "hgvsWellDefined": "XP_011523794.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS092611"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 773,
          "referenceAllele": "G",
          "start": 772
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525493.1:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523795.1:p.Arg250Gln",
        "hgvsWellDefined": "XP_011523795.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS092612"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 771,
          "referenceAllele": "G",
          "start": 770
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525494.1:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523796.1:p.Arg250Gln",
        "hgvsWellDefined": "XP_011523796.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS092613"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 998,
          "referenceAllele": "G",
          "start": 997
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525495.1:c.938G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523797.1:p.Arg313Gln",
        "hgvsWellDefined": "XP_011523797.1:p.Arg313Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS092614"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2827075516",
      "coordinates": [
        {
          "allele": "A",
          "end": 908,
          "referenceAllele": "G",
          "start": 907
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "NM_001321120.2:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001308049.1:p.Arg250Gln",
        "hgvsWellDefined": "NP_001308049.1:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS514053",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000644296.1:c.749G>A"
          },
          "RefSeq": {
            "hgvs": "NM_001321120.2:c.749G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000495986.1:p.Arg250Gln"
          },
          "RefSeq": {
            "hgvs": "NP_001308049.1:p.Arg250Gln"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA658830837",
      "coordinates": [
        {
          "allele": "A",
          "end": 752,
          "referenceAllele": "G",
          "start": 751
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "NM_018488.3:c.749G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_060958.2:p.Arg250Gln",
        "hgvsWellDefined": "NP_060958.2:p.Arg250Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS525911"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 950,
          "referenceAllele": "G",
          "start": 949
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525490.2:c.938G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523792.1:p.Arg313Gln",
        "hgvsWellDefined": "XP_011523792.1:p.Arg313Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS547912"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 950,
          "referenceAllele": "G",
          "start": 949
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525491.2:c.938G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523793.1:p.Arg313Gln",
        "hgvsWellDefined": "XP_011523793.1:p.Arg313Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS547913"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 953,
          "referenceAllele": "G",
          "start": 952
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011603",
      "geneNCBI_id": 9496,
      "geneSymbol": "TBX4",
      "hgvs": [
        "XM_011525495.2:c.938G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011523797.1:p.Arg313Gln",
        "hgvsWellDefined": "XP_011523797.1:p.Arg313Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS547914"
    }
  ],
  "type": "nucleotide"
}