{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA382824780",
  "communityStandardTitle": [
    "NM_001197104.2(KMT2A):c.3461G>A (p.Arg1154Gln)"
  ],
  "externalRecords": {
    "COSMIC": [
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=3764281",
        "active": true,
        "id": "COSM3764281"
      },
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=3764282",
        "active": true,
        "id": "COSM3764282"
      }
    ],
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=421824[alleleid]",
        "alleleId": 421824,
        "preferredName": "NM_001197104.2(KMT2A):c.3461G>A (p.Arg1154Gln)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/430144",
        "RCV": [
          "RCV000493579",
          "RCV000504302",
          "RCV000623546",
          "RCV002248724"
        ],
        "variationId": 430144
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr11:g.118348808G>A?assembly=hg19",
        "id": "chr11:g.118348808G>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr11:g.118478093G>A?assembly=hg38",
        "id": "chr11:g.118478093G>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1131691799",
        "rs": 1131691799
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "A",
          "end": 118478093,
          "referenceAllele": "G",
          "start": 118478092
        }
      ],
      "hgvs": [
        "NC_000011.10:g.118478093G>A",
        "CM000673.2:g.118478093G>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000059"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "A",
          "end": 118348808,
          "referenceAllele": "G",
          "start": 118348807
        }
      ],
      "hgvs": [
        "NC_000011.9:g.118348808G>A",
        "CM000673.1:g.118348808G>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000035"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "A",
          "end": 117854018,
          "referenceAllele": "G",
          "start": 117854017
        }
      ],
      "hgvs": [
        "NC_000011.8:g.117854018G>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000011"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 46604,
          "referenceAllele": "G",
          "start": 46603
        }
      ],
      "hgvs": [
        "NG_027813.1:g.46604G>A",
        "LRG_613:g.46604G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS003978"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3581,
          "referenceAllele": "G",
          "start": 3580
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000531904.7:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000432391.3:p.Arg1187Gln",
        "hgvsWellDefined": "ENSP00000432391.3:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS914243"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3616,
          "referenceAllele": "G",
          "start": 3615
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000710560.1:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000518343.1:p.Arg1187Gln",
        "hgvsWellDefined": "ENSP00000518343.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS914540"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1064,
          "referenceAllele": "G",
          "start": 1063
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000527869.7:c.1043G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000432652.3:p.Arg348Gln",
        "hgvsWellDefined": "ENSP00000432652.3:p.Arg348Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS825743"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 965,
          "referenceAllele": "G",
          "start": 964
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000533790.3:c.944G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000436700.3:p.Arg315Gln",
        "hgvsWellDefined": "ENSP00000436700.3:p.Arg315Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS825836"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1289,
          "referenceAllele": "G",
          "start": 1288
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000649690.2:c.1268G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000497372.2:p.Arg423Gln",
        "hgvsWellDefined": "ENSP00000497372.2:p.Arg423Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS826788"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 442,
          "referenceAllele": "G",
          "start": 441
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000685719.1:c.442G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS830218"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3469,
          "referenceAllele": "G",
          "start": 3468
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000691053.1:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000509168.1:p.Arg1154Gln",
        "hgvsWellDefined": "ENSP00000509168.1:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS833016"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3484,
          "referenceAllele": "G",
          "start": 3483
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000389506.10:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000374157.5:p.Arg1154Gln",
        "hgvsWellDefined": "ENSP00000374157.5:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS752814"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 713,
          "referenceAllele": "G",
          "start": 712
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000533790.2:c.713G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000436700.2:p.Arg238Gln",
        "hgvsWellDefined": "ENSP00000436700.2:p.Arg238Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS759361"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3482,
          "referenceAllele": "G",
          "start": 3481
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000534358.8:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000436786.2:p.Arg1154Gln",
        "hgvsWellDefined": "ENSP00000436786.2:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS759393",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000534358.8:c.3461G>A"
          },
          "RefSeq": {
            "hgvs": "NM_001197104.2:c.3461G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000436786.2:p.Arg1154Gln"
          },
          "RefSeq": {
            "hgvs": "NP_001184033.1:p.Arg1154Gln"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3140,
          "referenceAllele": "G",
          "start": 3139
        }
      ],
      "hgvs": [
        "ENST00000648261.1:c.2231G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000498126.1:p.Arg744Gln",
        "hgvsWellDefined": "ENSP00000498126.1:p.Arg744Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS769869"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3461,
          "referenceAllele": "G",
          "start": 3460
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000649699.1:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000496927.1:p.Arg1154Gln",
        "hgvsWellDefined": "ENSP00000496927.1:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS770690"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3461,
          "referenceAllele": "G",
          "start": 3460
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000389506.9:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000374157.5:p.Arg1154Gln",
        "hgvsWellDefined": "ENSP00000374157.5:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS274225"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3563,
          "referenceAllele": "G",
          "start": 3562
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000531904.6:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000432391.2:p.Arg1187Gln",
        "hgvsWellDefined": "ENSP00000432391.2:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS356916"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 695,
          "referenceAllele": "G",
          "start": 694
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000533790.1:c.695G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000436700.1:p.Arg232Gln",
        "hgvsWellDefined": "ENSP00000436700.1:p.Arg232Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS358507"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3484,
          "referenceAllele": "G",
          "start": 3483
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "ENST00000534358.5:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000436786.1:p.Arg1154Gln",
        "hgvsWellDefined": "ENSP00000436786.1:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS358979"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645381822",
      "coordinates": [
        {
          "allele": "A",
          "end": 3484,
          "referenceAllele": "G",
          "start": 3483
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "NM_001197104.1:c.3461G>A",
        "LRG_613t1:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001184033.1:p.Arg1154Gln",
        "hgvsWellDefined": "NP_001184033.1:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS016695"
    },
    {
      "@id": "http://reg.genome.network/allele/PA916009833",
      "coordinates": [
        {
          "allele": "A",
          "end": 3484,
          "referenceAllele": "G",
          "start": 3483
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "NM_005933.3:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_005924.2:p.Arg1154Gln",
        "hgvsWellDefined": "NP_005924.2:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS030989"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 959,
          "referenceAllele": "G",
          "start": 958
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_006718839.2:c.944G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006718902.2:p.Arg315Gln",
        "hgvsWellDefined": "XP_006718902.2:p.Arg315Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS072816"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542829.1:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541131.1:p.Arg1187Gln",
        "hgvsWellDefined": "XP_011541131.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS109758"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542830.1:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541132.1:p.Arg1187Gln",
        "hgvsWellDefined": "XP_011541132.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS109759"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542831.1:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541133.1:p.Arg1187Gln",
        "hgvsWellDefined": "XP_011541133.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS109760"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1382,
          "referenceAllele": "G",
          "start": 1381
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542832.1:c.1367G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541134.1:p.Arg456Gln",
        "hgvsWellDefined": "XP_011541134.1:p.Arg456Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS109761"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1058,
          "referenceAllele": "G",
          "start": 1057
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542833.1:c.1043G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541135.1:p.Arg348Gln",
        "hgvsWellDefined": "XP_011541135.1:p.Arg348Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS109762"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 959,
          "referenceAllele": "G",
          "start": 958
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_006718839.3:c.944G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006718902.2:p.Arg315Gln",
        "hgvsWellDefined": "XP_006718902.2:p.Arg315Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS539720"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542829.2:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541131.1:p.Arg1187Gln",
        "hgvsWellDefined": "XP_011541131.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554940"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542830.2:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541132.1:p.Arg1187Gln",
        "hgvsWellDefined": "XP_011541132.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554941"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 3575,
          "referenceAllele": "G",
          "start": 3574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542831.2:c.3560G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541133.1:p.Arg1187Gln",
        "hgvsWellDefined": "XP_011541133.1:p.Arg1187Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554942"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1058,
          "referenceAllele": "G",
          "start": 1057
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "XM_011542833.2:c.1043G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011541135.1:p.Arg348Gln",
        "hgvsWellDefined": "XP_011541135.1:p.Arg348Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554943"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645381822",
      "coordinates": [
        {
          "allele": "A",
          "end": 3482,
          "referenceAllele": "G",
          "start": 3481
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "NM_001197104.2:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001184033.1:p.Arg1154Gln",
        "hgvsWellDefined": "NP_001184033.1:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS679350",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000534358.8:c.3461G>A"
          },
          "RefSeq": {
            "hgvs": "NM_001197104.2:c.3461G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000436786.2:p.Arg1154Gln"
          },
          "RefSeq": {
            "hgvs": "NP_001184033.1:p.Arg1154Gln"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA916009833",
      "coordinates": [
        {
          "allele": "A",
          "end": 3482,
          "referenceAllele": "G",
          "start": 3481
        }
      ],
      "gene": "http://reg.genome.network/gene/GN007132",
      "geneNCBI_id": 4297,
      "geneSymbol": "KMT2A",
      "hgvs": [
        "NM_005933.4:c.3461G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_005924.2:p.Arg1154Gln",
        "hgvsWellDefined": "NP_005924.2:p.Arg1154Gln"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696566"
    }
  ],
  "type": "nucleotide"
}