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      "coordinates": [
        {
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          "end": 1242,
          "referenceAllele": "G",
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      "gene": "http://reg.genome.network/gene/GN010969",
      "geneNCBI_id": 6584,
      "geneSymbol": "SLC22A5",
      "hgvs": [
        "XR_948290.2:n.1242G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS614989"
    },
    {
      "coordinates": [
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      "gene": "http://reg.genome.network/gene/GN010969",
      "geneNCBI_id": 6584,
      "geneSymbol": "SLC22A5",
      "hgvs": [
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      "referenceSequence": "http://reg.genome.network/refseq/RS614990"
    },
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      "gene": "http://reg.genome.network/gene/GN010969",
      "geneNCBI_id": 6584,
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      "hgvs": [
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        "hgvsWellDefined": "NP_003051.1:p.Ala301Thr"
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      "MANE": {
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        "maneStatus": "MANE Select",
        "nucleotide": {
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      "referenceSequence": "http://reg.genome.network/refseq/RS717230"
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  ],
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}