{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA344912560",
  "communityStandardTitle": [
    "NM_206933.4(USH2A):c.956G>T (p.Cys319Phe)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=2668270[alleleid]",
        "alleleId": 2668270,
        "preferredName": "NM_206933.4(USH2A):c.956G>T (p.Cys319Phe)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/2503086",
        "RCV": [
          "RCV003389547"
        ],
        "variationId": 2503086
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.216498834C>A?assembly=hg19",
        "id": "chr1:g.216498834C>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.216325492C>A?assembly=hg38",
        "id": "chr1:g.216325492C>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/121912599",
        "rs": 121912599
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 216325492,
          "referenceAllele": "C",
          "start": 216325491
        }
      ],
      "hgvs": [
        "NC_000001.11:g.216325492C>A",
        "CM000663.2:g.216325492C>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000049"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 216498834,
          "referenceAllele": "C",
          "start": 216498833
        }
      ],
      "hgvs": [
        "NC_000001.10:g.216498834C>A",
        "CM000663.1:g.216498834C>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000025"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 214565457,
          "referenceAllele": "C",
          "start": 214565456
        }
      ],
      "hgvs": [
        "NC_000001.9:g.214565457C>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000001"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 102905,
          "referenceAllele": "G",
          "start": 102904
        }
      ],
      "hgvs": [
        "NG_009497.1:g.102905G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001602"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 102957,
          "referenceAllele": "G",
          "start": 102956
        }
      ],
      "hgvs": [
        "NG_009497.2:g.102957G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS706096"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1395,
          "referenceAllele": "G",
          "start": 1394
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "ENST00000307340.8:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000305941.3:p.Cys319Phe",
        "hgvsWellDefined": "ENSP00000305941.3:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS745360",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000307340.8:c.956G>T"
          },
          "RefSeq": {
            "hgvs": "NM_206933.4:c.956G>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000305941.3:p.Cys319Phe"
          },
          "RefSeq": {
            "hgvs": "NP_996816.3:p.Cys319Phe"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1395,
          "referenceAllele": "G",
          "start": 1394
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "ENST00000674083.1:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501296.1:p.Cys319Phe",
        "hgvsWellDefined": "ENSP00000501296.1:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774106"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1343,
          "referenceAllele": "G",
          "start": 1342
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "ENST00000307340.7:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000305941.3:p.Cys319Phe",
        "hgvsWellDefined": "ENSP00000305941.3:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS255872"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1343,
          "referenceAllele": "G",
          "start": 1342
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "ENST00000366942.3:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000355909.3:p.Cys319Phe",
        "hgvsWellDefined": "ENSP00000355909.3:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS266105"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1343,
          "referenceAllele": "G",
          "start": 1342
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "NM_007123.5:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_009054.5:p.Cys319Phe",
        "hgvsWellDefined": "NP_009054.5:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS032063"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1343,
          "referenceAllele": "G",
          "start": 1342
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "NM_206933.2:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_996816.2:p.Cys319Phe",
        "hgvsWellDefined": "NP_996816.2:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS045339"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1395,
          "referenceAllele": "G",
          "start": 1394
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "NM_206933.3:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_996816.2:p.Cys319Phe",
        "hgvsWellDefined": "NP_996816.2:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS673266"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829688253",
      "coordinates": [
        {
          "allele": "T",
          "end": 1395,
          "referenceAllele": "G",
          "start": 1394
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "NM_007123.6:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_009054.6:p.Cys319Phe",
        "hgvsWellDefined": "NP_009054.6:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696915"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2742037162",
      "coordinates": [
        {
          "allele": "T",
          "end": 1395,
          "referenceAllele": "G",
          "start": 1394
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012601",
      "geneNCBI_id": 7399,
      "geneSymbol": "USH2A",
      "hgvs": [
        "NM_206933.4:c.956G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_996816.3:p.Cys319Phe",
        "hgvsWellDefined": "NP_996816.3:p.Cys319Phe"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS701702",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000307340.8:c.956G>T"
          },
          "RefSeq": {
            "hgvs": "NM_206933.4:c.956G>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000305941.3:p.Cys319Phe"
          },
          "RefSeq": {
            "hgvs": "NP_996816.3:p.Cys319Phe"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}