{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA340729785",
  "communityStandardTitle": [
    "NM_144701.3(IL23R):c.1826A>C (p.Asn609Thr)"
  ],
  "externalRecords": {
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.67724747A>C?assembly=hg19",
        "id": "chr1:g.67724747A>C"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.67259064A>C?assembly=hg38",
        "id": "chr1:g.67259064A>C"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "C",
          "end": 67259064,
          "referenceAllele": "A",
          "start": 67259063
        }
      ],
      "hgvs": [
        "NC_000001.11:g.67259064A>C",
        "CM000663.2:g.67259064A>C"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000049"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "C",
          "end": 67724747,
          "referenceAllele": "A",
          "start": 67724746
        }
      ],
      "hgvs": [
        "NC_000001.10:g.67724747A>C",
        "CM000663.1:g.67724747A>C"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000025"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "C",
          "end": 67497335,
          "referenceAllele": "A",
          "start": 67497334
        }
      ],
      "hgvs": [
        "NC_000001.9:g.67497335A>C"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000001"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 97579,
          "referenceAllele": "A",
          "start": 97578
        }
      ],
      "hgvs": [
        "NG_011498.1:g.97579A>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001766"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1665,
          "referenceAllele": "A",
          "start": 1664
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697149.1:c.1665A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513138.1:n.1665A>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908554"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1723,
          "referenceAllele": "A",
          "start": 1722
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697150.1:c.1723A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513139.1:n.1723A>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908555"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1656,
          "referenceAllele": "A",
          "start": 1655
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697151.1:c.1656A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513140.1:n.1656A>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908556"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1736,
          "referenceAllele": "A",
          "start": 1735
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697164.1:c.1736A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513153.1:p.Asn579Thr",
        "hgvsWellDefined": "ENSP00000513153.1:p.Asn579Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908569"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1523,
          "referenceAllele": "A",
          "start": 1522
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697165.1:c.1523A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513154.1:p.Asn508Thr",
        "hgvsWellDefined": "ENSP00000513154.1:p.Asn508Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908570"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1943,
          "referenceAllele": "A",
          "start": 1942
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000347310.10:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000321345.5:p.Asn609Thr",
        "hgvsWellDefined": "ENSP00000321345.5:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS748335",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000347310.10:c.1826A>C"
          },
          "RefSeq": {
            "hgvs": "NM_144701.3:c.1826A>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000321345.5:p.Asn609Thr"
          },
          "RefSeq": {
            "hgvs": "NP_653302.2:p.Asn609Thr"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2105,
          "referenceAllele": "A",
          "start": 2104
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000637002.1:c.1217A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000490340.1:p.Asn406Thr",
        "hgvsWellDefined": "ENSP00000490340.1:p.Asn406Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS763538"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1997,
          "referenceAllele": "A",
          "start": 1996
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000347310.9:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000321345.5:p.Asn609Thr",
        "hgvsWellDefined": "ENSP00000321345.5:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS262348"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 852,
          "referenceAllele": "A",
          "start": 851
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000395227.2:c.620A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000378652.2:p.Asn207Thr",
        "hgvsWellDefined": "ENSP00000378652.2:p.Asn207Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS276583"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1111,
          "referenceAllele": "A",
          "start": 1110
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000425614.3:c.1061A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000387640.2:p.Asn354Thr",
        "hgvsWellDefined": "ENSP00000387640.2:p.Asn354Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS288838"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 896,
          "referenceAllele": "A",
          "start": 895
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000473881.2:c.*652A>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000486667.1:n.*652A>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS315520"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1911,
          "referenceAllele": "A",
          "start": 1910
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "NM_144701.2:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_653302.2:p.Asn609Thr",
        "hgvsWellDefined": "NP_653302.2:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS041217"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1557,
          "referenceAllele": "A",
          "start": 1556
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_005270516.2:c.1064A>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005270573.1:p.Asn355Thr",
        "hgvsWellDefined": "XP_005270573.1:p.Asn355Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS066559"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2440,
          "referenceAllele": "A",
          "start": 2439
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540789.1:c.1916A>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539091.1:p.Asn639Thr",
        "hgvsWellDefined": "XP_011539091.1:p.Asn639Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS107733"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2377,
          "referenceAllele": "A",
          "start": 2376
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540790.1:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539092.1:p.Asn609Thr",
        "hgvsWellDefined": "XP_011539092.1:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS107734"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1896,
          "referenceAllele": "A",
          "start": 1895
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540791.1:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539093.1:p.Asn609Thr",
        "hgvsWellDefined": "XP_011539093.1:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS107735"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 2378,
          "referenceAllele": "A",
          "start": 2377
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540790.3:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539092.1:p.Asn609Thr",
        "hgvsWellDefined": "XP_011539092.1:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554170"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1896,
          "referenceAllele": "A",
          "start": 1895
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540791.3:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539093.1:p.Asn609Thr",
        "hgvsWellDefined": "XP_011539093.1:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554171"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1906,
          "referenceAllele": "A",
          "start": 1905
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XR_001736993.1:n.1906A>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS587830"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1943,
          "referenceAllele": "A",
          "start": 1942
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "NM_144701.3:c.1826A>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_653302.2:p.Asn609Thr",
        "hgvsWellDefined": "NP_653302.2:p.Asn609Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699932",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000347310.10:c.1826A>C"
          },
          "RefSeq": {
            "hgvs": "NM_144701.3:c.1826A>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000321345.5:p.Asn609Thr"
          },
          "RefSeq": {
            "hgvs": "NP_653302.2:p.Asn609Thr"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}