{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA340729756",
  "communityStandardTitle": [
    "NM_144701.3(IL23R):c.1820C>A (p.Ser607Tyr)"
  ],
  "externalRecords": {
    "COSMIC": [
      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4009648",
        "active": true,
        "id": "COSM4009648"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.67724741C>A?assembly=hg19",
        "id": "chr1:g.67724741C>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.67259058C>A?assembly=hg38",
        "id": "chr1:g.67259058C>A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 67259058,
          "referenceAllele": "C",
          "start": 67259057
        }
      ],
      "hgvs": [
        "NC_000001.11:g.67259058C>A",
        "CM000663.2:g.67259058C>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000049"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 67724741,
          "referenceAllele": "C",
          "start": 67724740
        }
      ],
      "hgvs": [
        "NC_000001.10:g.67724741C>A",
        "CM000663.1:g.67724741C>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000025"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 67497329,
          "referenceAllele": "C",
          "start": 67497328
        }
      ],
      "hgvs": [
        "NC_000001.9:g.67497329C>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000001"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 97573,
          "referenceAllele": "C",
          "start": 97572
        }
      ],
      "hgvs": [
        "NG_011498.1:g.97573C>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001766"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1659,
          "referenceAllele": "C",
          "start": 1658
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697149.1:c.1659C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513138.1:n.1659C>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908554"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1717,
          "referenceAllele": "C",
          "start": 1716
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697150.1:c.1717C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513139.1:n.1717C>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908555"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1650,
          "referenceAllele": "C",
          "start": 1649
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697151.1:c.1650C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513140.1:n.1650C>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908556"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1730,
          "referenceAllele": "C",
          "start": 1729
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697164.1:c.1730C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513153.1:p.Ser577Tyr",
        "hgvsWellDefined": "ENSP00000513153.1:p.Ser577Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908569"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1517,
          "referenceAllele": "C",
          "start": 1516
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000697165.1:c.1517C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000513154.1:p.Ser506Tyr",
        "hgvsWellDefined": "ENSP00000513154.1:p.Ser506Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS908570"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1937,
          "referenceAllele": "C",
          "start": 1936
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000347310.10:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000321345.5:p.Ser607Tyr",
        "hgvsWellDefined": "ENSP00000321345.5:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS748335",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000347310.10:c.1820C>A"
          },
          "RefSeq": {
            "hgvs": "NM_144701.3:c.1820C>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000321345.5:p.Ser607Tyr"
          },
          "RefSeq": {
            "hgvs": "NP_653302.2:p.Ser607Tyr"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2099,
          "referenceAllele": "C",
          "start": 2098
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000637002.1:c.1211C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000490340.1:p.Ser404Tyr",
        "hgvsWellDefined": "ENSP00000490340.1:p.Ser404Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS763538"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1991,
          "referenceAllele": "C",
          "start": 1990
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000347310.9:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000321345.5:p.Ser607Tyr",
        "hgvsWellDefined": "ENSP00000321345.5:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS262348"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 846,
          "referenceAllele": "C",
          "start": 845
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000395227.2:c.614C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000378652.2:p.Ser205Tyr",
        "hgvsWellDefined": "ENSP00000378652.2:p.Ser205Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS276583"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1105,
          "referenceAllele": "C",
          "start": 1104
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000425614.3:c.1055C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000387640.2:p.Ser352Tyr",
        "hgvsWellDefined": "ENSP00000387640.2:p.Ser352Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS288838"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 890,
          "referenceAllele": "C",
          "start": 889
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "ENST00000473881.2:c.*646C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000486667.1:n.*646C>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS315520"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1905,
          "referenceAllele": "C",
          "start": 1904
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "NM_144701.2:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_653302.2:p.Ser607Tyr",
        "hgvsWellDefined": "NP_653302.2:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS041217"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1551,
          "referenceAllele": "C",
          "start": 1550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_005270516.2:c.1058C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005270573.1:p.Ser353Tyr",
        "hgvsWellDefined": "XP_005270573.1:p.Ser353Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS066559"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2434,
          "referenceAllele": "C",
          "start": 2433
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540789.1:c.1910C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539091.1:p.Ser637Tyr",
        "hgvsWellDefined": "XP_011539091.1:p.Ser637Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS107733"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2371,
          "referenceAllele": "C",
          "start": 2370
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540790.1:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539092.1:p.Ser607Tyr",
        "hgvsWellDefined": "XP_011539092.1:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS107734"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1890,
          "referenceAllele": "C",
          "start": 1889
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540791.1:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539093.1:p.Ser607Tyr",
        "hgvsWellDefined": "XP_011539093.1:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS107735"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2372,
          "referenceAllele": "C",
          "start": 2371
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540790.3:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539092.1:p.Ser607Tyr",
        "hgvsWellDefined": "XP_011539092.1:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554170"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1890,
          "referenceAllele": "C",
          "start": 1889
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XM_011540791.3:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011539093.1:p.Ser607Tyr",
        "hgvsWellDefined": "XP_011539093.1:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS554171"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1900,
          "referenceAllele": "C",
          "start": 1899
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "XR_001736993.1:n.1900C>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS587830"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1937,
          "referenceAllele": "C",
          "start": 1936
        }
      ],
      "gene": "http://reg.genome.network/gene/GN019100",
      "geneNCBI_id": 149233,
      "geneSymbol": "IL23R",
      "hgvs": [
        "NM_144701.3:c.1820C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_653302.2:p.Ser607Tyr",
        "hgvsWellDefined": "NP_653302.2:p.Ser607Tyr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699932",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000347310.10:c.1820C>A"
          },
          "RefSeq": {
            "hgvs": "NM_144701.3:c.1820C>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000321345.5:p.Ser607Tyr"
          },
          "RefSeq": {
            "hgvs": "NP_653302.2:p.Ser607Tyr"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}