{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA339524866",
  "communityStandardTitle": [
    "NM_000911.4(OPRD1):c.79T>A (p.Cys27Ser)"
  ],
  "externalRecords": {
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.29138974T>A?assembly=hg19",
        "id": "chr1:g.29138974T>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr1:g.28812462T>A?assembly=hg38",
        "id": "chr1:g.28812462T>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/773584186",
        "rs": 773584186
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/1-28812462-T-A?dataset=gnomad_r4",
        "id": "1-28812462-T-A",
        "variant": "1:28812462 T / A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 28812462,
          "referenceAllele": "T",
          "start": 28812461
        }
      ],
      "hgvs": [
        "NC_000001.11:g.28812462T>A",
        "CM000663.2:g.28812462T>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000049"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 29138974,
          "referenceAllele": "T",
          "start": 29138973
        }
      ],
      "hgvs": [
        "NC_000001.10:g.29138974T>A",
        "CM000663.1:g.29138974T>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000025"
    },
    {
      "chromosome": "1",
      "coordinates": [
        {
          "allele": "A",
          "end": 29011561,
          "referenceAllele": "T",
          "start": 29011560
        }
      ],
      "hgvs": [
        "NC_000001.9:g.29011561T>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000001"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 293,
          "referenceAllele": "T",
          "start": 292
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008153",
      "geneNCBI_id": 4985,
      "geneSymbol": "OPRD1",
      "hgvs": [
        "ENST00000234961.7:c.79T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000234961.2:p.Cys27Ser",
        "hgvsWellDefined": "ENSP00000234961.2:p.Cys27Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS740966",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000234961.7:c.79T>A"
          },
          "RefSeq": {
            "hgvs": "NM_000911.4:c.79T>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000234961.2:p.Cys27Ser"
          },
          "RefSeq": {
            "hgvs": "NP_000902.3:p.Cys27Ser"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 321,
          "referenceAllele": "T",
          "start": 320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008153",
      "geneNCBI_id": 4985,
      "geneSymbol": "OPRD1",
      "hgvs": [
        "ENST00000234961.6:c.79T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000234961.2:p.Cys27Ser",
        "hgvsWellDefined": "ENSP00000234961.2:p.Cys27Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS248934"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 321,
          "referenceAllele": "T",
          "start": 320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008153",
      "geneNCBI_id": 4985,
      "geneSymbol": "OPRD1",
      "hgvs": [
        "ENST00000621425.1:c.79T>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000477970.1:p.Cys27Ser",
        "hgvsWellDefined": "ENSP00000477970.1:p.Cys27Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS405268"
    },
    {
      "@id": "http://reg.genome.network/allele/PA3063874190",
      "coordinates": [
        {
          "allele": "A",
          "end": 321,
          "referenceAllele": "T",
          "start": 320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008153",
      "geneNCBI_id": 4985,
      "geneSymbol": "OPRD1",
      "hgvs": [
        "NM_000911.3:c.79T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000902.3:p.Cys27Ser",
        "hgvsWellDefined": "NP_000902.3:p.Cys27Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006936"
    },
    {
      "@id": "http://reg.genome.network/allele/PA3063874190",
      "coordinates": [
        {
          "allele": "A",
          "end": 293,
          "referenceAllele": "T",
          "start": 292
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008153",
      "geneNCBI_id": 4985,
      "geneSymbol": "OPRD1",
      "hgvs": [
        "NM_000911.4:c.79T>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000902.3:p.Cys27Ser",
        "hgvsWellDefined": "NP_000902.3:p.Cys27Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662643",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000234961.7:c.79T>A"
          },
          "RefSeq": {
            "hgvs": "NM_000911.4:c.79T>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000234961.2:p.Cys27Ser"
          },
          "RefSeq": {
            "hgvs": "NP_000902.3:p.Cys27Ser"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}