{ "@context": "http://reg.genome.network/schema/allele.jsonld", "@id": "http://reg.genome.network/allele/CA338252192", "communityStandardTitle": [ "NM_022089.4(ATP13A2):c.1459C>T (p.Arg487Ter)" ], "externalRecords": { "COSMIC": [ { "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=3478456", "active": true, "id": "COSM3478456" }, { "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4664235", "active": true, "id": "COSM4664235" } ], "ClinVarAlleles": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=511191[alleleid]", "alleleId": 511191, "preferredName": "NM_022089.4(ATP13A2):c.1459C>T (p.Arg487Ter)" } ], "ClinVarVariations": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/520750", "RCV": [ "RCV000624309", "RCV003767821" ], "variationId": 520750 } ], "MyVariantInfo_hg19": [ { "@id": "http://myvariant.info/v1/variant/chr1:g.17322554G>A?assembly=hg19", "id": "chr1:g.17322554G>A" } ], "MyVariantInfo_hg38": [ { "@id": "http://myvariant.info/v1/variant/chr1:g.16996059G>A?assembly=hg38", "id": "chr1:g.16996059G>A" } ], "dbSNP": [ { "@id": "http://www.ncbi.nlm.nih.gov/snp/1303653650", "rs": 1303653650 } ], "gnomAD_3": [ { "@id": "http://gnomad.broadinstitute.org/variant/1-16996059-G-A?dataset=gnomad_r3", "id": "1-16996059-G-A", "variant": "1:16996059 G / A" } ], "gnomAD_4": [ { "@id": "http://gnomad.broadinstitute.org/variant/1-16996059-G-A?dataset=gnomad_r4", "id": "1-16996059-G-A", "variant": "1:16996059 G / A" } ] }, "genomicAlleles": [ { "chromosome": "1", "coordinates": [ { "allele": "A", "end": 16996059, "referenceAllele": "G", "start": 16996058 } ], "hgvs": [ "NC_000001.11:g.16996059G>A", "CM000663.2:g.16996059G>A" ], "referenceGenome": "GRCh38", "referenceSequence": "http://reg.genome.network/refseq/RS000049" }, { "chromosome": "1", "coordinates": [ { "allele": "A", "end": 17322554, "referenceAllele": "G", "start": 17322553 } ], "hgvs": [ "NC_000001.10:g.17322554G>A", "CM000663.1:g.17322554G>A" ], "referenceGenome": "GRCh37", "referenceSequence": "http://reg.genome.network/refseq/RS000025" }, { "chromosome": "1", "coordinates": [ { "allele": "A", "end": 17195141, "referenceAllele": "G", "start": 17195140 } ], "hgvs": [ "NC_000001.9:g.17195141G>A" ], "referenceGenome": "NCBI36", "referenceSequence": "http://reg.genome.network/refseq/RS000001" }, { "coordinates": [ { "allele": "T", "end": 20870, "referenceAllele": "C", "start": 20869 } ], "hgvs": [ "NG_009054.1:g.20870C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS001396" } ], "transcriptAlleles": [ { "coordinates": [ { "allele": "T", "end": 1649, "referenceAllele": "C", "start": 1648 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000326735.13:c.1459C>T" ], "proteinEffect": { "hgvs": "ENSP00000327214.8:p.Arg487Ter", "hgvsWellDefined": "ENSP00000327214.8:p.Arg487_Arg1180delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS746785", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000326735.13:c.1459C>T" }, "RefSeq": { "hgvs": "NM_022089.4:c.1459C>T" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000327214.8:p.Arg487Ter" }, "RefSeq": { "hgvs": "NP_071372.1:p.Arg487Ter" } } } }, { "coordinates": [ { "allele": "T", "end": 1493, "referenceAllele": "C", "start": 1492 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000326735.12:c.1459C>T" ], "proteinEffect": { "hgvs": "ENSP00000327214.8:p.Arg487Ter", "hgvsWellDefined": "ENSP00000327214.8:p.Arg487_Arg1180delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS258661" }, { "coordinates": [ { "allele": "T", "end": 1621, "referenceAllele": "C", "start": 1620 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000341676.9:c.1444C>T" ], "proteinEffect": { "hgvs": "ENSP00000341115.5:p.Arg482Ter", "hgvsWellDefined": "ENSP00000341115.5:p.Arg482_Val1158delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS261383" }, { "coordinates": [ { "allele": "T", "end": 1634, "referenceAllele": "C", "start": 1633 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000452699.5:c.1444C>T" ], "proteinEffect": { "hgvs": "ENSP00000413307.1:p.Arg482Ter", "hgvsWellDefined": "ENSP00000413307.1:p.Arg482_Arg1175delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS301738" }, { "coordinates": [ { "allele": "T", "end": 1067, "referenceAllele": "C", "start": 1066 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000463860.5:n.1067C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS307803" }, { "coordinates": [ { "allele": "T", "end": 487, "referenceAllele": "C", "start": 486 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000502860.1:n.487C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS335319" }, { "coordinates": [ { "allele": "T", "end": 136, "referenceAllele": "C", "start": 135 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000503552.1:c.136C>T" ], "proteinEffect": { "hgvs": "ENSP00000421126.1:p.Arg46Ter", "hgvsWellDefined": "ENSP00000421126.1:p.Arg46_Ser258del" }, "referenceSequence": "http://reg.genome.network/refseq/RS335833" }, { "coordinates": [ { "allele": "T", "end": 547, "referenceAllele": "C", "start": 546 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000509392.1:n.547C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS340168" }, { "coordinates": [ { "allele": "T", "end": 1523, "referenceAllele": "C", "start": 1522 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "ENST00000617114.4:c.487C>T" ], "proteinEffect": { "hgvs": "ENSP00000478781.1:p.Arg163Ter", "hgvsWellDefined": "ENSP00000478781.1:p.Arg163_Val228delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysValGlyProGlnValGlyLeuValGlnGlySerGlyThrAlaThrGlyAlaProValArgProProHisProArgTyrSerLeuSerSerThrHisArgMetProGlyProValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS403341" }, { "@id": "http://reg.genome.network/allele/PA2825835345", "coordinates": [ { "allele": "T", "end": 1678, "referenceAllele": "C", "start": 1677 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "NM_001141973.2:c.1444C>T" ], "proteinEffect": { "hgvs": "NP_001135445.1:p.Arg482Ter", "hgvsWellDefined": "NP_001135445.1:p.Arg482_Arg1175delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS012784" }, { "@id": "http://reg.genome.network/allele/PA2825836653", "coordinates": [ { "allele": "T", "end": 1678, "referenceAllele": "C", "start": 1677 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "NM_001141974.2:c.1444C>T" ], "proteinEffect": { "hgvs": "NP_001135446.1:p.Arg482Ter", "hgvsWellDefined": "NP_001135446.1:p.Arg482_Val1158delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS012785" }, { "@id": "http://reg.genome.network/allele/PA658807830", "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "NM_022089.3:c.1459C>T" ], "proteinEffect": { "hgvs": "NP_071372.1:p.Arg487Ter", "hgvsWellDefined": "NP_071372.1:p.Arg487_Arg1180delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS037187" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_005245809.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_005245866.1:p.Arg487Ter", "hgvsWellDefined": "XP_005245866.1:p.Arg487_Val1202delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS057382" }, { "coordinates": [ { "allele": "T", "end": 1690, "referenceAllele": "C", "start": 1689 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_005245810.1:c.1456C>T" ], "proteinEffect": { "hgvs": "XP_005245867.1:p.Arg486Ter", "hgvsWellDefined": "XP_005245867.1:p.Arg486_Val1201delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS057383" }, { "coordinates": [ { "allele": "T", "end": 1678, "referenceAllele": "C", "start": 1677 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_005245811.1:c.1444C>T" ], "proteinEffect": { "hgvs": "XP_005245868.1:p.Arg482Ter", "hgvsWellDefined": "XP_005245868.1:p.Arg482_Val1197delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS057384" }, { "coordinates": [ { "allele": "T", "end": 1666, "referenceAllele": "C", "start": 1665 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_005245812.1:c.1432C>T" ], "proteinEffect": { "hgvs": "XP_005245869.1:p.Arg478Ter", "hgvsWellDefined": "XP_005245869.1:p.Arg478_Val1193delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS057385" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_005245813.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_005245870.1:p.Arg487Ter", "hgvsWellDefined": "XP_005245870.1:p.Arg487_Val1182delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS057386" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_005245815.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_005245872.1:p.Arg487Ter", "hgvsWellDefined": "XP_005245872.1:p.Arg487_Val1163delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS057387" }, { "coordinates": [ { "allele": "T", "end": 1675, "referenceAllele": "C", "start": 1674 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_006710512.1:c.1441C>T" ], "proteinEffect": { "hgvs": "XP_006710575.1:p.Arg481Ter", "hgvsWellDefined": "XP_006710575.1:p.Arg481_Val1196delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS068650" }, { "coordinates": [ { "allele": "T", "end": 1651, "referenceAllele": "C", "start": 1650 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_006710513.1:c.1417C>T" ], "proteinEffect": { "hgvs": "XP_006710576.1:p.Arg473Ter", "hgvsWellDefined": "XP_006710576.1:p.Arg473_Val1188delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS068651" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_011541128.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_011539430.1:p.Arg487Ter", "hgvsWellDefined": "XP_011539430.1:p.Arg487_Val1197delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS108071" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_011541129.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_011539431.1:p.Arg487Ter", "hgvsWellDefined": "XP_011539431.1:p.Arg487_Val1133delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS108072" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000844.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_016856333.1:p.Arg487Ter", "hgvsWellDefined": "XP_016856333.1:p.Arg487_Arg1175delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557124" }, { "coordinates": [ { "allele": "T", "end": 1675, "referenceAllele": "C", "start": 1674 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000845.1:c.1441C>T" ], "proteinEffect": { "hgvs": "XP_016856334.1:p.Arg481Ter", "hgvsWellDefined": "XP_016856334.1:p.Arg481_Arg1174delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557125" }, { "coordinates": [ { "allele": "T", "end": 1651, "referenceAllele": "C", "start": 1650 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000846.1:c.1417C>T" ], "proteinEffect": { "hgvs": "XP_016856335.1:p.Arg473Ter", "hgvsWellDefined": "XP_016856335.1:p.Arg473_Arg1166delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557126" }, { "coordinates": [ { "allele": "T", "end": 1663, "referenceAllele": "C", "start": 1662 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000847.1:c.1429C>T" ], "proteinEffect": { "hgvs": "XP_016856336.1:p.Arg477Ter", "hgvsWellDefined": "XP_016856336.1:p.Arg477_Arg1165delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557127" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000848.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_016856337.1:p.Arg487Ter", "hgvsWellDefined": "XP_016856337.1:p.Arg487_Arg1141delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557128" }, { "coordinates": [ { "allele": "T", "end": 1678, "referenceAllele": "C", "start": 1677 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000849.1:c.1444C>T" ], "proteinEffect": { "hgvs": "XP_016856338.1:p.Arg482Ter", "hgvsWellDefined": "XP_016856338.1:p.Arg482_Arg1136delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557129" }, { "coordinates": [ { "allele": "T", "end": 1693, "referenceAllele": "C", "start": 1692 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "XM_017000850.1:c.1459C>T" ], "proteinEffect": { "hgvs": "XP_016856339.1:p.Arg487Ter", "hgvsWellDefined": "XP_016856339.1:p.Arg487_Arg1111delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS557130" }, { "@id": "http://reg.genome.network/allele/PA658807830", "coordinates": [ { "allele": "T", "end": 1649, "referenceAllele": "C", "start": 1648 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "NM_022089.4:c.1459C>T" ], "proteinEffect": { "hgvs": "NP_071372.1:p.Arg487Ter", "hgvsWellDefined": "NP_071372.1:p.Arg487_Arg1180delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS670368", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000326735.13:c.1459C>T" }, "RefSeq": { "hgvs": "NM_022089.4:c.1459C>T" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000327214.8:p.Arg487Ter" }, "RefSeq": { "hgvs": "NP_071372.1:p.Arg487Ter" } } } }, { "@id": "http://reg.genome.network/allele/PA2825835345", "coordinates": [ { "allele": "T", "end": 1634, "referenceAllele": "C", "start": 1633 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "NM_001141973.3:c.1444C>T" ], "proteinEffect": { "hgvs": "NP_001135445.1:p.Arg482Ter", "hgvsWellDefined": "NP_001135445.1:p.Arg482_Arg1175delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysAspProAspGlnAlaAlaSerTyrThrValGluProAspProArgSerArgHisLeuAlaLeuSerGlyProThrPheGlyIleIleValLysHisPheProLysLeuLeuProLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnValProPheLeuValAlaLeuAlaLeuLeuSerSerValLeuValGlyLeuValLeuValProGlyLeuLeuGlnGlyProLeuAlaLeuArgAsnIleThrAspThrGlyPheLysLeuLeuLeuLeuGlyLeuValThrLeuAsnPheValGlyAlaPheMetLeuGluSerValLeuAspGlnCysLeuProAlaCysLeuArgArgLeuArgProLysArgAlaSerLysLysArgPheLysGlnLeuGluArgGluLeuAlaGluGlnProTrpProProLeuProAlaGlyProLeuArgTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS677479" }, { "@id": "http://reg.genome.network/allele/PA2825836653", "coordinates": [ { "allele": "T", "end": 1634, "referenceAllele": "C", "start": 1633 } ], "gene": "http://reg.genome.network/gene/GN030213", "geneNCBI_id": 23400, "geneSymbol": "ATP13A2", "hgvs": [ "NM_001141974.3:c.1444C>T" ], "proteinEffect": { "hgvs": "NP_001135446.1:p.Arg482Ter", "hgvsWellDefined": "NP_001135446.1:p.Arg482_Val1158delinsLeuArgArgGlnGlyIlePheCysIleHisProLeuArgIleAsnLeuGlyGlyLysLeuGlnLeuValCysPheAspLysThrGlyThrLeuThrGluAspGlyLeuAspValMetGlyValValProLeuLysGlyGlnAlaPheLeuProLeuValProGluProArgArgLeuProValGlyProLeuLeuArgAlaLeuAlaThrCysHisAlaLeuSerArgLeuGlnAspThrProValGlyAspProMetAspLeuLysMetValGluSerThrGlyTrpValLeuGluGluGluProAlaAlaAspSerAlaPheGlyThrGlnValLeuAlaValMetArgProProLeuTrpGluProGlnLeuGlnAlaMetGluGluProProValProValSerValLeuHisArgPheProPheSerSerAlaLeuGlnArgMetSerValValValAlaTrpProGlyAlaThrGlnProGluAlaTyrValLysGlySerProGluLeuValAlaGlyLeuCysAsnProGluThrValProThrAspPheAlaGlnMetLeuGlnSerTyrThrAlaAlaGlyTyrArgValValAlaLeuAlaSerLysProLeuProThrValProSerLeuGluAlaAlaGlnGlnLeuThrArgAspThrValGluGlyAspLeuSerLeuLeuGlyLeuLeuValMetArgAsnLeuLeuLysProGlnThrThrProValIleGlnAlaLeuArgArgThrArgIleArgAlaValMetValThrGlyAspAsnLeuGlnThrAlaValThrValAlaArgGlyCysGlyMetValAlaProGlnGluHisLeuIleIleValHisAlaThrHisProGluArgGlyGlnProAlaSerLeuGluPheLeuProMetGluSerProThrAlaValAsnGlyValLysValLeuValGlnGlyThrValPheAlaArgMetAlaProGluGlnLysThrGluLeuValCysGluLeuGlnLysLeuGlnTyrCysValGlyMetCysGlyAspGlyAlaAsnAspCysGlyAlaLeuLysAlaAlaAspValGlyIleSerLeuSerGlnAlaGluAlaSerValValSerProPheThrSerSerMetAlaSerIleGluCysValProMetValIleArgGluGlyArgCysSerLeuAspThrSerPheSerValPheLysTyrMetAlaLeuTyrSerLeuThrGlnPheIleSerValLeuIleLeuTyrThrIleAsnThrAsnLeuGlyAspLeuGlnPheLeuAlaIleAspLeuValIleThrThrThrValAlaValLeuMetSerArgThrGlyProAlaLeuValLeuGlyArgValArgProProGlyAlaLeuLeuSerValProValLeuSerSerLeuLeuLeuGlnMetValLeuValThrGlyValGlnLeuGlyGlyTyrPheLeuThrLeuAlaGlnProTrpPheValProLeuAsnArgThrValAlaAlaProAspAsnLeuProAsnTyrGluAsnThrValValPheSerLeuSerSerPheGlnTyrLeuIleLeuAlaAlaAlaValSerLysGlyAlaProPheArgArgProLeuTyrThrAsnGluArgAlaArgProValProProArgLeuProAlaProProProAlaGlnAlaGlyLeuGlnGluAlaLeuGlnAlaAlaGlyThrArgAlaGlyArgAlaAlaLeuAlaAlaAlaAlaArgArgProProGluValValGlnAlaHisGlyHisProArgHisTrpAsnSerLeuProLeuSerHisGlnLeuAspProSerProAlaThrProProProProProProThrSerLeuArgLeuAlaThrValTyrThrProProProArgProProProProTrpGlySerValAspTyrCysProLeuProTrpThrIleProArgArgGlyGlySerProGlnLeuProSerValLeuLeuSerValTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS677480" } ], "type": "nucleotide" }