{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA266166",
  "communityStandardTitle": [
    "NM_000276.4(OCRL):c.821T>C (p.Ile274Thr)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=79616[alleleid]",
        "alleleId": 79616,
        "preferredName": "NM_000276.4(OCRL):c.821T>C (p.Ile274Thr)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/68724",
        "RCV": [
          "RCV000059605"
        ],
        "variationId": 68724
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.128694625T>C?assembly=hg19",
        "id": "chrX:g.128694625T>C"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chrX:g.129560648T>C?assembly=hg38",
        "id": "chrX:g.129560648T>C"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/137853829",
        "rs": 137853829
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 129560648,
          "referenceAllele": "T",
          "start": 129560647
        }
      ],
      "hgvs": [
        "NC_000023.11:g.129560648T>C",
        "CM000685.2:g.129560648T>C"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000071"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 128694625,
          "referenceAllele": "T",
          "start": 128694624
        }
      ],
      "hgvs": [
        "NC_000023.10:g.128694625T>C",
        "CM000685.1:g.128694625T>C"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000047"
    },
    {
      "chromosome": "X",
      "coordinates": [
        {
          "allele": "C",
          "end": 128522306,
          "referenceAllele": "T",
          "start": 128522305
        }
      ],
      "hgvs": [
        "NC_000023.9:g.128522306T>C"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000023"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 25374,
          "referenceAllele": "T",
          "start": 25373
        }
      ],
      "hgvs": [
        "NG_008638.1:g.25374T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001137"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1391,
          "referenceAllele": "T",
          "start": 1390
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000691455.1:c.*1113T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000510265.1:n.*1113T>C"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS833224"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 938,
          "referenceAllele": "T",
          "start": 937
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000693473.1:c.938T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS834263"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1002,
          "referenceAllele": "T",
          "start": 1001
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000371113.9:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000360154.4:p.Ile274Thr",
        "hgvsWellDefined": "ENSP00000360154.4:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS750725",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000371113.9:c.821T>C"
          },
          "RefSeq": {
            "hgvs": "NM_000276.4:c.821T>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000360154.4:p.Ile274Thr"
          },
          "RefSeq": {
            "hgvs": "NP_000267.2:p.Ile274Thr"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 869,
          "referenceAllele": "T",
          "start": 868
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000646010.1:c.869T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS768650"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 472,
          "referenceAllele": "T",
          "start": 471
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000647245.1:c.472T>C"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS769311"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 986,
          "referenceAllele": "T",
          "start": 985
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000357121.5:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000349635.5:p.Ile274Thr",
        "hgvsWellDefined": "ENSP00000349635.5:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS263990"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 986,
          "referenceAllele": "T",
          "start": 985
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "ENST00000371113.8:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000360154.4:p.Ile274Thr",
        "hgvsWellDefined": "ENSP00000360154.4:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS268420"
    },
    {
      "@id": "http://reg.genome.network/allele/PA104691",
      "coordinates": [
        {
          "allele": "C",
          "end": 986,
          "referenceAllele": "T",
          "start": 985
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_000276.3:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000267.2:p.Ile274Thr",
        "hgvsWellDefined": "NP_000267.2:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006338"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829331783",
      "coordinates": [
        {
          "allele": "C",
          "end": 986,
          "referenceAllele": "T",
          "start": 985
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001587.3:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001578.2:p.Ile274Thr",
        "hgvsWellDefined": "NP_001578.2:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS026944"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 793,
          "referenceAllele": "T",
          "start": 792
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_005262422.1:c.350T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262479.1:p.Ile117Thr",
        "hgvsWellDefined": "XP_005262479.1:p.Ile117Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS063448"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1003,
          "referenceAllele": "T",
          "start": 1002
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531342.1:c.824T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529644.1:p.Ile275Thr",
        "hgvsWellDefined": "XP_011529644.1:p.Ile275Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098378"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 916,
          "referenceAllele": "T",
          "start": 915
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531343.1:c.824T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529645.1:p.Ile275Thr",
        "hgvsWellDefined": "XP_011529645.1:p.Ile275Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098379"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 895,
          "referenceAllele": "T",
          "start": 894
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531344.1:c.677T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529646.1:p.Ile226Thr",
        "hgvsWellDefined": "XP_011529646.1:p.Ile226Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098380"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 911,
          "referenceAllele": "T",
          "start": 910
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531345.1:c.677T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529647.1:p.Ile226Thr",
        "hgvsWellDefined": "XP_011529647.1:p.Ile226Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098381"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 918,
          "referenceAllele": "T",
          "start": 917
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531346.1:c.824T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529648.1:p.Ile275Thr",
        "hgvsWellDefined": "XP_011529648.1:p.Ile275Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS098382"
    },
    {
      "@id": "http://reg.genome.network/allele/PA916022577",
      "coordinates": [
        {
          "allele": "C",
          "end": 1009,
          "referenceAllele": "T",
          "start": 1008
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001318784.1:c.824T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001305713.1:p.Ile275Thr",
        "hgvsWellDefined": "NP_001305713.1:p.Ile275Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS513020"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 793,
          "referenceAllele": "T",
          "start": 792
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_005262422.2:c.350T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_005262479.1:p.Ile117Thr",
        "hgvsWellDefined": "XP_005262479.1:p.Ile117Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS535480"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 899,
          "referenceAllele": "T",
          "start": 898
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531344.3:c.677T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529646.1:p.Ile226Thr",
        "hgvsWellDefined": "XP_011529646.1:p.Ile226Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550338"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 902,
          "referenceAllele": "T",
          "start": 901
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_011531345.3:c.677T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_011529647.1:p.Ile226Thr",
        "hgvsWellDefined": "XP_011529647.1:p.Ile226Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS550339"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 917,
          "referenceAllele": "T",
          "start": 916
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "XM_017029554.1:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "XP_016885043.1:p.Ile274Thr",
        "hgvsWellDefined": "XP_016885043.1:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS579074"
    },
    {
      "@id": "http://reg.genome.network/allele/PA104691",
      "coordinates": [
        {
          "allele": "C",
          "end": 1002,
          "referenceAllele": "T",
          "start": 1001
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_000276.4:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_000267.2:p.Ile274Thr",
        "hgvsWellDefined": "NP_000267.2:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS662380",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000371113.9:c.821T>C"
          },
          "RefSeq": {
            "hgvs": "NM_000276.4:c.821T>C"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000360154.4:p.Ile274Thr"
          },
          "RefSeq": {
            "hgvs": "NP_000267.2:p.Ile274Thr"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA916022577",
      "coordinates": [
        {
          "allele": "C",
          "end": 1005,
          "referenceAllele": "T",
          "start": 1004
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001318784.2:c.824T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001305713.1:p.Ile275Thr",
        "hgvsWellDefined": "NP_001305713.1:p.Ile275Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS684598"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2829331783",
      "coordinates": [
        {
          "allele": "C",
          "end": 1002,
          "referenceAllele": "T",
          "start": 1001
        }
      ],
      "gene": "http://reg.genome.network/gene/GN008108",
      "geneNCBI_id": 4952,
      "geneSymbol": "OCRL",
      "hgvs": [
        "NM_001587.4:c.821T>C"
      ],
      "proteinEffect": {
        "hgvs": "NP_001578.2:p.Ile274Thr",
        "hgvsWellDefined": "NP_001578.2:p.Ile274Thr"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS695324"
    }
  ],
  "type": "nucleotide"
}