{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA248994",
  "communityStandardTitle": [
    "NM_181882.3(PRX):c.3496C>T (p.Pro1166Ser)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=213454[alleleid]",
        "alleleId": 213454,
        "preferredName": "NM_181882.3(PRX):c.3496C>T (p.Pro1166Ser)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/216835",
        "RCV": [
          "RCV000202796",
          "RCV001086843",
          "RCV001172771",
          "RCV001509034",
          "RCV001135981",
          "RCV002453729"
        ],
        "variationId": 216835
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/19-40900763-G-A",
        "id": "19-40900763-G-A",
        "variant": "19:40900763 G / A"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40900763G>A?assembly=hg19",
        "id": "chr19:g.40900763G>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr19:g.40394856G>A?assembly=hg38",
        "id": "chr19:g.40394856G>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/147826200",
        "rs": 147826200
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40900763-G-A?dataset=gnomad_r2_1",
        "id": "19-40900763-G-A",
        "variant": "19:40900763 G / A"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40394856-G-A?dataset=gnomad_r3",
        "id": "19-40394856-G-A",
        "variant": "19:40394856 G / A"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/19-40394856-G-A?dataset=gnomad_r4",
        "id": "19-40394856-G-A",
        "variant": "19:40394856 G / A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "A",
          "end": 40394856,
          "referenceAllele": "G",
          "start": 40394855
        }
      ],
      "hgvs": [
        "NC_000019.10:g.40394856G>A",
        "CM000681.2:g.40394856G>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000067"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "A",
          "end": 40900763,
          "referenceAllele": "G",
          "start": 40900762
        }
      ],
      "hgvs": [
        "NC_000019.9:g.40900763G>A",
        "CM000681.1:g.40900763G>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000043"
    },
    {
      "chromosome": "19",
      "coordinates": [
        {
          "allele": "A",
          "end": 45592603,
          "referenceAllele": "G",
          "start": 45592602
        }
      ],
      "hgvs": [
        "NC_000019.8:g.45592603G>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000019"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 23509,
          "referenceAllele": "C",
          "start": 23508
        }
      ],
      "hgvs": [
        "NG_007979.1:g.23509C>T",
        "LRG_265:g.23509C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS000747"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 366,
          "referenceAllele": "C",
          "start": 365
        }
      ],
      "hgvs": [
        "NG_051224.1:g.366C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS616912"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3779,
          "referenceAllele": "C",
          "start": 3778
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.8:c.3496C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Pro1166Ser",
        "hgvsWellDefined": "ENSP00000326018.6:p.Pro1166Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS746601",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3496C>T"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3496C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Pro1166Ser"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Pro1166Ser"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3895,
          "referenceAllele": "C",
          "start": 3894
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000673881.1:c.3079C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501070.1:p.Pro1027Ser",
        "hgvsWellDefined": "ENSP00000501070.1:p.Pro1027Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS773939"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3832,
          "referenceAllele": "C",
          "start": 3831
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674005.2:c.3781C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000501261.1:p.Pro1261Ser",
        "hgvsWellDefined": "ENSP00000501261.1:p.Pro1261Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774039"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3345,
          "referenceAllele": "C",
          "start": 3344
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000674773.1:c.3079C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000502579.1:p.Pro1027Ser",
        "hgvsWellDefined": "ENSP00000502579.1:p.Pro1027Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS774689"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3371,
          "referenceAllele": "C",
          "start": 3370
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000675517.1:c.3371C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775326"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3357,
          "referenceAllele": "C",
          "start": 3356
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676076.1:c.3357C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775811"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3458,
          "referenceAllele": "C",
          "start": 3457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676260.1:c.3458C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS775970"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3383,
          "referenceAllele": "C",
          "start": 3382
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000676316.1:c.3383C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS776013"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 4414,
          "referenceAllele": "C",
          "start": 4413
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000291825.11:c.*3701C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000291825.6:n.*3701C>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS253765"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3767,
          "referenceAllele": "C",
          "start": 3766
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "ENST00000324001.7:c.3496C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000326018.6:p.Pro1166Ser",
        "hgvsWellDefined": "ENSP00000326018.6:p.Pro1166Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS258283"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 4414,
          "referenceAllele": "C",
          "start": 4413
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_020956.2:c.*3701C>T",
        "LRG_265t1:c.*3701C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_066007.1:n.*3701C>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS036720"
    },
    {
      "@id": "http://reg.genome.network/allele/PA248996",
      "coordinates": [
        {
          "allele": "T",
          "end": 3765,
          "referenceAllele": "C",
          "start": 3764
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.2:c.3496C>T",
        "LRG_265t2:c.3496C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Pro1166Ser",
        "hgvsWellDefined": "NP_870998.2:p.Pro1166Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS043920"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3757,
          "referenceAllele": "C",
          "start": 3756
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.1:c.3496C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Pro1166Ser",
        "hgvsWellDefined": "XP_011525473.1:p.Pro1166Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS094265"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3757,
          "referenceAllele": "C",
          "start": 3756
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_011527171.2:c.3496C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011525473.1:p.Pro1166Ser",
        "hgvsWellDefined": "XP_011525473.1:p.Pro1166Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS548559"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3916,
          "referenceAllele": "C",
          "start": 3915
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027046.1:c.3394C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882535.1:p.Pro1132Ser",
        "hgvsWellDefined": "XP_016882535.1:p.Pro1132Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577044"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3459,
          "referenceAllele": "C",
          "start": 3458
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "XM_017027047.1:c.3394C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016882536.1:p.Pro1132Ser",
        "hgvsWellDefined": "XP_016882536.1:p.Pro1132Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS577045"
    },
    {
      "@id": "http://reg.genome.network/allele/PA248996",
      "coordinates": [
        {
          "allele": "T",
          "end": 3779,
          "referenceAllele": "C",
          "start": 3778
        }
      ],
      "gene": "http://reg.genome.network/gene/GN013797",
      "geneNCBI_id": 57716,
      "geneSymbol": "PRX",
      "hgvs": [
        "NM_181882.3:c.3496C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_870998.2:p.Pro1166Ser",
        "hgvsWellDefined": "NP_870998.2:p.Pro1166Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS701039",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000324001.8:c.3496C>T"
          },
          "RefSeq": {
            "hgvs": "NM_181882.3:c.3496C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000326018.6:p.Pro1166Ser"
          },
          "RefSeq": {
            "hgvs": "NP_870998.2:p.Pro1166Ser"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}