{ "@context": "http://reg.genome.network/schema/allele.jsonld", "@id": "http://reg.genome.network/allele/CA2267625", "communityStandardTitle": [ "NM_004628.5(XPC):c.658C>T (p.Arg220Ter)" ], "externalRecords": { "ClinVarAlleles": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=543068[alleleid]", "alleleId": 543068, "preferredName": "NM_004628.5(XPC):c.658C>T (p.Arg220Ter)" } ], "ClinVarVariations": [ { "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/550020", "RCV": [ "RCV000664637", "RCV001201195", "RCV001385310" ], "variationId": 550020 } ], "ExAC": [ { "@id": "http://exac.broadinstitute.org/variant/3-14207049-G-A", "id": "3-14207049-G-A", "variant": "3:14207049 G / A" } ], "MyVariantInfo_hg19": [ { "@id": "http://myvariant.info/v1/variant/chr3:g.14207049G>A?assembly=hg19", "id": "chr3:g.14207049G>A" } ], "MyVariantInfo_hg38": [ { "@id": "http://myvariant.info/v1/variant/chr3:g.14165549G>A?assembly=hg38", "id": "chr3:g.14165549G>A" } ], "dbSNP": [ { "@id": "http://www.ncbi.nlm.nih.gov/snp/745679643", "rs": 745679643 } ], "gnomAD_2": [ { "@id": "http://gnomad.broadinstitute.org/variant/3-14207049-G-A?dataset=gnomad_r2_1", "id": "3-14207049-G-A", "variant": "3:14207049 G / A" } ], "gnomAD_3": [ { "@id": "http://gnomad.broadinstitute.org/variant/3-14165549-G-A?dataset=gnomad_r3", "id": "3-14165549-G-A", "variant": "3:14165549 G / A" } ], "gnomAD_4": [ { "@id": "http://gnomad.broadinstitute.org/variant/3-14165549-G-A?dataset=gnomad_r4", "id": "3-14165549-G-A", "variant": "3:14165549 G / A" } ] }, "genomicAlleles": [ { "chromosome": "3", "coordinates": [ { "allele": "A", "end": 14165549, "referenceAllele": "G", "start": 14165548 } ], "hgvs": [ "NC_000003.12:g.14165549G>A", "CM000665.2:g.14165549G>A" ], "referenceGenome": "GRCh38", "referenceSequence": "http://reg.genome.network/refseq/RS000051" }, { "chromosome": "3", "coordinates": [ { "allele": "A", "end": 14207049, "referenceAllele": "G", "start": 14207048 } ], "hgvs": [ "NC_000003.11:g.14207049G>A", "CM000665.1:g.14207049G>A" ], "referenceGenome": "GRCh37", "referenceSequence": "http://reg.genome.network/refseq/RS000027" }, { "chromosome": "3", "coordinates": [ { "allele": "A", "end": 14182053, "referenceAllele": "G", "start": 14182052 } ], "hgvs": [ "NC_000003.10:g.14182053G>A" ], "referenceGenome": "NCBI36", "referenceSequence": "http://reg.genome.network/refseq/RS000003" }, { "coordinates": [ { "allele": "T", "end": 18124, "referenceAllele": "C", "start": 18123 } ], "hgvs": [ "NG_011763.1:g.18124C>T", "LRG_472:g.18124C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS001956" } ], "transcriptAlleles": [ { "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "ENST00000285021.12:c.658C>T" ], "proteinEffect": { "hgvs": "ENSP00000285021.8:p.Arg220Ter", "hgvsWellDefined": "ENSP00000285021.8:p.Arg220_Leu940delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS743792", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000285021.12:c.658C>T" }, "RefSeq": { "hgvs": "NM_004628.5:c.658C>T" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000285021.8:p.Arg220Ter" }, "RefSeq": { "hgvs": "NP_004619.3:p.Arg220Ter" } } } }, { "coordinates": [ { "allele": "T", "end": 873, "referenceAllele": "C", "start": 872 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "ENST00000285021.11:c.658C>T" ], "proteinEffect": { "hgvs": "ENSP00000285021.7:p.Arg220Ter", "hgvsWellDefined": "ENSP00000285021.7:p.Arg220_Leu940delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS253275" }, { "coordinates": [ { "allele": "T", "end": 423, "referenceAllele": "C", "start": 422 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "ENST00000452172.1:n.423C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS301505" }, { "coordinates": [ { "allele": "T", "end": 269, "referenceAllele": "C", "start": 268 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "ENST00000455144.6:n.269C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS302903" }, { "coordinates": [ { "allele": "T", "end": 567, "referenceAllele": "C", "start": 566 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "ENST00000476581.6:c.*111C>T" ], "proteinEffect": { "hgvs": "ENSP00000424548.1:n.*111C>T" }, "referenceSequence": "http://reg.genome.network/refseq/RS317599" }, { "coordinates": [ { "allele": "T", "end": 136, "referenceAllele": "C", "start": 135 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "ENST00000477324.6:n.136C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS318167" }, { "@id": "http://reg.genome.network/allele/PA658828984", "coordinates": [ { "allele": "T", "end": 762, "referenceAllele": "C", "start": 761 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_004628.4:c.658C>T", "LRG_472t1:c.658C>T" ], "proteinEffect": { "hgvs": "NP_004619.3:p.Arg220Ter", "hgvsWellDefined": "NP_004619.3:p.Arg220_Leu940delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS029783" }, { "coordinates": [ { "allele": "T", "end": 638, "referenceAllele": "C", "start": 637 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NR_027299.1:n.638C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS047665" }, { "coordinates": [ { "allele": "T", "end": 719, "referenceAllele": "C", "start": 718 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "XM_011534092.1:c.658C>T" ], "proteinEffect": { "hgvs": "XP_011532394.1:p.Arg220Ter", "hgvsWellDefined": "XP_011532394.1:p.Arg220_Leu851delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluAlaAlaSerValCysSerGlnAlaLeuProSerProLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS101110" }, { "coordinates": [ { "allele": "T", "end": 719, "referenceAllele": "C", "start": 718 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "XM_011534093.1:c.658C>T" ], "proteinEffect": { "hgvs": "XP_011532395.1:p.Arg220Ter", "hgvsWellDefined": "XP_011532395.1:p.Arg220_Pro689delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgLysMetSerArgCysCysLeuProValAsnProTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS101111" }, { "@id": "http://reg.genome.network/allele/PA916039304", "coordinates": [ { "allele": "T", "end": 638, "referenceAllele": "C", "start": 637 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354726.1:c.79C>T" ], "proteinEffect": { "hgvs": "NP_001341655.1:p.Arg27Ter", "hgvsWellDefined": "NP_001341655.1:p.Arg27_Leu747delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS522642" }, { "@id": "http://reg.genome.network/allele/PA2827927579", "coordinates": [ { "allele": "T", "end": 762, "referenceAllele": "C", "start": 761 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354727.1:c.658C>T" ], "proteinEffect": { "hgvs": "NP_001341656.1:p.Arg220Ter", "hgvsWellDefined": "NP_001341656.1:p.Arg220_Leu938delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluGluAspValGlnMetLeuProThrCysGlnProLeuArgProLeuPheTyrProLeuLeuSerGluAspHisAspHisAspIleIleThrProLeuGlySerGlnArgCysSerAlaProSerGlySerMetSerGlyAlaLeuSerSerGlyArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS522643" }, { "@id": "http://reg.genome.network/allele/PA2827928095", "coordinates": [ { "allele": "T", "end": 744, "referenceAllele": "C", "start": 743 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354729.1:c.640C>T" ], "proteinEffect": { "hgvs": "NP_001341658.1:p.Arg214Ter", "hgvsWellDefined": "NP_001341658.1:p.Arg214_Leu934delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS522644" }, { "@id": "http://reg.genome.network/allele/PA2827928661", "coordinates": [ { "allele": "T", "end": 762, "referenceAllele": "C", "start": 761 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354730.1:c.658C>T" ], "proteinEffect": { "hgvs": "NP_001341659.1:p.Arg220Ter", "hgvsWellDefined": "NP_001341659.1:p.Arg220_Leu858delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS522645" }, { "coordinates": [ { "allele": "T", "end": 762, "referenceAllele": "C", "start": 761 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NR_148950.1:n.762C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS531398" }, { "coordinates": [ { "allele": "T", "end": 638, "referenceAllele": "C", "start": 637 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NR_148951.1:n.638C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS531399" }, { "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "XR_001740256.2:n.691C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS590467" }, { "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "XR_002959580.1:n.691C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS605512" }, { "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "XR_002959581.1:n.691C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS605513" }, { "@id": "http://reg.genome.network/allele/PA2827927579", "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354727.2:c.658C>T" ], "proteinEffect": { "hgvs": "NP_001341656.1:p.Arg220Ter", "hgvsWellDefined": "NP_001341656.1:p.Arg220_Leu938delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluGluAspValGlnMetLeuProThrCysGlnProLeuArgProLeuPheTyrProLeuLeuSerGluAspHisAspHisAspIleIleThrProLeuGlySerGlnArgCysSerAlaProSerGlySerMetSerGlyAlaLeuSerSerGlyArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS690308" }, { "@id": "http://reg.genome.network/allele/PA658828984", "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_004628.5:c.658C>T" ], "proteinEffect": { "hgvs": "NP_004619.3:p.Arg220Ter", "hgvsWellDefined": "NP_004619.3:p.Arg220_Leu940delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS696195", "MANE": { "maneVersion": "1.3", "maneStatus": "MANE Select", "nucleotide": { "Ensembl": { "hgvs": "ENST00000285021.12:c.658C>T" }, "RefSeq": { "hgvs": "NM_004628.5:c.658C>T" } }, "protein": { "Ensembl": { "hgvs": "ENSP00000285021.8:p.Arg220Ter" }, "RefSeq": { "hgvs": "NP_004619.3:p.Arg220Ter" } } } }, { "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NR_148950.2:n.691C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS704894" }, { "coordinates": [ { "allele": "T", "end": 567, "referenceAllele": "C", "start": 566 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NR_148951.2:n.567C>T" ], "referenceSequence": "http://reg.genome.network/refseq/RS704895" }, { "@id": "http://reg.genome.network/allele/PA916039304", "coordinates": [ { "allele": "T", "end": 567, "referenceAllele": "C", "start": 566 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354726.2:c.79C>T" ], "proteinEffect": { "hgvs": "NP_001341655.1:p.Arg27Ter", "hgvsWellDefined": "NP_001341655.1:p.Arg27_Leu747delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS720554" }, { "@id": "http://reg.genome.network/allele/PA2827928095", "coordinates": [ { "allele": "T", "end": 673, "referenceAllele": "C", "start": 672 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354729.2:c.640C>T" ], "proteinEffect": { "hgvs": "NP_001341658.1:p.Arg214Ter", "hgvsWellDefined": "NP_001341658.1:p.Arg214_Leu934delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpValCysValAspCysValHisGlyValValGlyGlnProLeuThrCysTyrLysTyrAlaThrLysProMetThrTyrValValGlyIleAspSerAspGlyTrpValArgAspValThrGlnArgTyrAspProValTrpMetThrValThrArgLysCysArgValAspAlaGluTrpTrpAlaGluThrLeuArgProTyrGlnSerProPheMetAspArgGluLysLysGluAspLeuGluPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS720555" }, { "@id": "http://reg.genome.network/allele/PA2827928661", "coordinates": [ { "allele": "T", "end": 691, "referenceAllele": "C", "start": 690 } ], "gene": "http://reg.genome.network/gene/GN012816", "geneNCBI_id": 7508, "geneSymbol": "XPC", "hgvs": [ "NM_001354730.2:c.658C>T" ], "proteinEffect": { "hgvs": "NP_001341659.1:p.Arg220Ter", "hgvsWellDefined": "NP_001341659.1:p.Arg220_Leu858delinsAsnAsnIleCysSerGlnProAspLeuHisAlaIleGlyLeuSerIleIleProAlaArgPheThrArgValLeuProArgAspValAspThrTyrTyrLeuSerAsnLeuValLysTrpPheIleGlyThrPheThrValAsnAlaGluLeuSerAlaSerGluGlnAspAsnLeuGlnThrThrLeuGluArgArgPheAlaIleTyrSerAlaArgAspAspGluGluLeuValHisIlePheLeuLeuIleLeuArgAlaLeuGlnLeuLeuThrArgLeuValLeuSerLeuGlnProIleProLeuLysSerAlaThrAlaLysGlyLysLysProSerLysGluArgLeuThrAlaAspProGlyGlySerSerGluThrSerSerGlnValLeuGluAsnHisThrLysProLysThrSerLysGlyThrLysGlnGluGluThrPheAlaLysGlyThrCysArgProSerAlaLysGlyLysArgAsnLysGlyGlyArgLysLysArgSerLysProSerSerSerGluGluAspGluGlyProGlyAspLysGlnGluLysAlaThrGlnArgArgProHisGlyArgGluArgArgValAlaSerArgValSerTyrLysGluGluSerGlySerAspGluAlaGlySerGlySerAspPheGluLeuSerSerGlyGluAlaSerAspProSerAspGluAspSerGluProGlyProProLysGlnArgLysAlaProAlaProGlnArgThrLysAlaGlySerLysSerAlaSerArgThrHisArgGlySerHisArgLysAspProSerLeuProAlaAlaSerSerSerSerSerSerSerLysArgGlyLysLysMetCysSerAspGlyGluLysAlaGluLysArgSerIleAlaGlyIleAspGlnTrpLeuGluValPheCysGluGlnGluGluLysTrpPheGlnAlaLysHisMetAspGlnProLeuProThrAlaIleGlyLeuTyrLysAsnHisProLeuTyrAlaLeuLysArgHisLeuLeuLysTyrGluAlaIleTyrProGluThrAlaAlaIleLeuGlyTyrCysArgGlyGluAlaValTyrSerArgAspCysValHisThrLeuHisSerArgAspThrTrpLeuLysLysAlaArgValValArgLeuGlyGluValProTyrLysMetValLysGlyPheSerAsnArgAlaArgLysAlaArgLeuAlaGluProGlnLeuArgGluGluAsnAspLeuGlyLeuPheGlyTyrTrpGlnThrGluGluTyrGlnProProValAlaValAspGlyLysValProArgAsnGluPheGlyAsnValTyrLeuPheLeuProSerMetMetProIleGlyCysValGlnLeuAsnLeuProAsnLeuHisArgValAlaArgLysLeuAspIleAspCysValGlnAlaIleThrGlyPheAspPheHisGlyGlyTyrSerHisProValThrAspGlyTyrIleValCysGluGluPheLysAspValLeuLeuThrAlaTrpGluAsnGluGlnAlaValIleGluArgLysGluLysGluLysLysGluLysArgAlaLeuGlyAsnTrpLysLeuLeuAlaLysGlyLeuLeuIleArgGluArgLeuLysArgArgTyrGlyProLysSerGluAlaAlaAlaProHisThrAspAlaGlyGlyGlyLeuSerSerAspGluGluGluGlyThrSerSerGlnAlaGluAlaAlaArgIleLeuAlaAlaSerTrpProGlnAsnArgGluAspGluGluLysGlnLysLeuLysGlyGlyProLysLysThrLysArgGluLysLysAlaAlaAlaSerHisLeuPheProPheGluGlnLeuTer" }, "referenceSequence": "http://reg.genome.network/refseq/RS720556" } ], "type": "nucleotide" }