{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA215987",
  "communityStandardTitle": [
    "NM_004369.4(COL6A3):c.6193G>A (p.Gly2065Ser)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=71513[alleleid]",
        "alleleId": 71513,
        "preferredName": "NM_004369.4(COL6A3):c.6193G>A (p.Gly2065Ser)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/56907",
        "RCV": [
          "RCV000050245",
          "RCV001853072"
        ],
        "variationId": 56907
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr2:g.238269781C>T?assembly=hg19",
        "id": "chr2:g.238269781C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr2:g.237361138C>T?assembly=hg38",
        "id": "chr2:g.237361138C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/397515332",
        "rs": 397515332
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "T",
          "end": 237361138,
          "referenceAllele": "C",
          "start": 237361137
        }
      ],
      "hgvs": [
        "NC_000002.12:g.237361138C>T",
        "CM000664.2:g.237361138C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000050"
    },
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "T",
          "end": 238269781,
          "referenceAllele": "C",
          "start": 238269780
        }
      ],
      "hgvs": [
        "NC_000002.11:g.238269781C>T",
        "CM000664.1:g.238269781C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000026"
    },
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "T",
          "end": 237934520,
          "referenceAllele": "C",
          "start": 237934519
        }
      ],
      "hgvs": [
        "NC_000002.10:g.237934520C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000002"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 58070,
          "referenceAllele": "G",
          "start": 58069
        }
      ],
      "hgvs": [
        "NG_008676.1:g.58070G>A",
        "LRG_473:g.58070G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001161"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5825,
          "referenceAllele": "G",
          "start": 5824
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000353578.9:c.5575G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000315873.4:p.Gly1859Ser",
        "hgvsWellDefined": "ENSP00000315873.4:p.Gly1859Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS824068"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 6435,
          "referenceAllele": "G",
          "start": 6434
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000295550.9:c.6193G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000295550.4:p.Gly2065Ser",
        "hgvsWellDefined": "ENSP00000295550.4:p.Gly2065Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS744301",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000295550.9:c.6193G>A"
          },
          "RefSeq": {
            "hgvs": "NM_004369.4:c.6193G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000295550.4:p.Gly2065Ser"
          },
          "RefSeq": {
            "hgvs": "NP_004360.2:p.Gly2065Ser"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 6646,
          "referenceAllele": "G",
          "start": 6645
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000295550.8:c.6193G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000295550.4:p.Gly2065Ser",
        "hgvsWellDefined": "ENSP00000295550.4:p.Gly2065Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS254109"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4598,
          "referenceAllele": "G",
          "start": 4597
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000347401.7:c.4372G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000315609.4:p.Gly1458Ser",
        "hgvsWellDefined": "ENSP00000315609.4:p.Gly1458Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS262355"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5860,
          "referenceAllele": "G",
          "start": 5859
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000353578.8:c.5575G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000315873.4:p.Gly1859Ser",
        "hgvsWellDefined": "ENSP00000315873.4:p.Gly1859Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS262979"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5575,
          "referenceAllele": "G",
          "start": 5574
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000409809.5:c.5575G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000386844.1:p.Gly1859Ser",
        "hgvsWellDefined": "ENSP00000386844.1:p.Gly1859Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS281868"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4598,
          "referenceAllele": "G",
          "start": 4597
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000472056.5:c.4372G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000418285.1:p.Gly1458Ser",
        "hgvsWellDefined": "ENSP00000418285.1:p.Gly1458Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS314119"
    },
    {
      "@id": "http://reg.genome.network/allele/PA215991",
      "coordinates": [
        {
          "allele": "A",
          "end": 6478,
          "referenceAllele": "G",
          "start": 6477
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_004369.3:c.6193G>A",
        "LRG_473t1:c.6193G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_004360.2:p.Gly2065Ser",
        "hgvsWellDefined": "NP_004360.2:p.Gly2065Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS029533"
    },
    {
      "@id": "http://reg.genome.network/allele/PA215989",
      "coordinates": [
        {
          "allele": "A",
          "end": 4657,
          "referenceAllele": "G",
          "start": 4656
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057166.4:c.4372G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476507.3:p.Gly1458Ser",
        "hgvsWellDefined": "NP_476507.3:p.Gly1458Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040059"
    },
    {
      "@id": "http://reg.genome.network/allele/PA215990",
      "coordinates": [
        {
          "allele": "A",
          "end": 5860,
          "referenceAllele": "G",
          "start": 5859
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057167.3:c.5575G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476508.2:p.Gly1859Ser",
        "hgvsWellDefined": "NP_476508.2:p.Gly1859Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040060"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5835,
          "referenceAllele": "G",
          "start": 5834
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_005246065.1:c.5593G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005246122.1:p.Gly1865Ser",
        "hgvsWellDefined": "XP_005246122.1:p.Gly1865Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS057455"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4981,
          "referenceAllele": "G",
          "start": 4980
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_005246066.1:c.4972G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005246123.1:p.Gly1658Ser",
        "hgvsWellDefined": "XP_005246123.1:p.Gly1658Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS057456"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5934,
          "referenceAllele": "G",
          "start": 5933
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_006712253.1:c.5692G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006712316.1:p.Gly1898Ser",
        "hgvsWellDefined": "XP_006712316.1:p.Gly1898Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS069545"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 6432,
          "referenceAllele": "G",
          "start": 6431
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_011510574.1:c.6190G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011508876.1:p.Gly2064Ser",
        "hgvsWellDefined": "XP_011508876.1:p.Gly2064Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS077837"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4235,
          "referenceAllele": "G",
          "start": 4234
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_011510575.1:c.3787G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011508877.1:p.Gly1263Ser",
        "hgvsWellDefined": "XP_011508877.1:p.Gly1263Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS077838"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4697,
          "referenceAllele": "G",
          "start": 4696
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_017003304.1:c.3787G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016858793.1:p.Gly1263Ser",
        "hgvsWellDefined": "XP_016858793.1:p.Gly1263Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS559074"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5183,
          "referenceAllele": "G",
          "start": 5182
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_024452684.1:c.4972G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_024308452.1:p.Gly1658Ser",
        "hgvsWellDefined": "XP_024308452.1:p.Gly1658Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS586075"
    },
    {
      "@id": "http://reg.genome.network/allele/PA215991",
      "coordinates": [
        {
          "allele": "A",
          "end": 6435,
          "referenceAllele": "G",
          "start": 6434
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_004369.4:c.6193G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_004360.2:p.Gly2065Ser",
        "hgvsWellDefined": "NP_004360.2:p.Gly2065Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696119",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000295550.9:c.6193G>A"
          },
          "RefSeq": {
            "hgvs": "NM_004369.4:c.6193G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000295550.4:p.Gly2065Ser"
          },
          "RefSeq": {
            "hgvs": "NP_004360.2:p.Gly2065Ser"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA215989",
      "coordinates": [
        {
          "allele": "A",
          "end": 4614,
          "referenceAllele": "G",
          "start": 4613
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057166.5:c.4372G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476507.3:p.Gly1458Ser",
        "hgvsWellDefined": "NP_476507.3:p.Gly1458Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699474"
    },
    {
      "@id": "http://reg.genome.network/allele/PA215990",
      "coordinates": [
        {
          "allele": "A",
          "end": 5817,
          "referenceAllele": "G",
          "start": 5816
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057167.4:c.5575G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476508.2:p.Gly1859Ser",
        "hgvsWellDefined": "NP_476508.2:p.Gly1859Ser"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS729011"
    }
  ],
  "type": "nucleotide"
}