{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA2015072242",
  "communityStandardTitle": [
    "NM_080387.5(CLEC4D):c.28+445T="
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/4534636",
        "rs": 4534636
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "12",
      "coordinates": [
        {
          "allele": "T",
          "end": 8514205,
          "referenceAllele": "T",
          "start": 8514204
        }
      ],
      "hgvs": [
        "NC_000012.12:g.8514205T=",
        "CM000674.2:g.8514205T="
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000060"
    },
    {
      "chromosome": "12",
      "coordinates": [
        {
          "allele": "T",
          "end": 8666801,
          "referenceAllele": "T",
          "start": 8666800
        }
      ],
      "hgvs": [
        "NC_000012.11:g.8666801T=",
        "CM000674.1:g.8666801T="
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000036"
    },
    {
      "chromosome": "12",
      "coordinates": [
        {
          "allele": "T",
          "end": 8558068,
          "referenceAllele": "T",
          "start": 8558067
        }
      ],
      "hgvs": [
        "NC_000012.10:g.8558068T="
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000012"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 258,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 258,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "ENST00000299665.3:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000299665.2:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS744697",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000299665.3:c.28+445T="
          },
          "RefSeq": {
            "hgvs": "NM_080387.5:c.28+445T="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000299665.2:n.28+445T="
          },
          "RefSeq": {
            "hgvs": "NP_525126.2:n.28+445T="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 221,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 221,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "ENST00000299665.2:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000299665.2:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS254763"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 179,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 179,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "ENST00000382064.6:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000371496.2:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS273602"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 221,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 221,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "NM_080387.4:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "NP_525126.2:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040141"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 200,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 200,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "XM_011520632.1:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "XP_011518934.1:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS087798"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 265,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 265,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "XM_011520633.1:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "XP_011518935.1:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS087799"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 190,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 190,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "XM_011520632.2:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "XP_011518934.1:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS545823"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 216,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 216,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "XM_011520633.2:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "XP_011518935.1:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS545824"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 258,
          "endIntronDirection": "+",
          "endIntronOffset": 445,
          "referenceAllele": "T",
          "start": 258,
          "startIntronDirection": "+",
          "startIntronOffset": 444
        }
      ],
      "gene": "http://reg.genome.network/gene/GN014554",
      "geneNCBI_id": 338339,
      "geneSymbol": "CLEC4D",
      "hgvs": [
        "NM_080387.5:c.28+445T="
      ],
      "proteinEffect": {
        "hgvs": "NP_525126.2:n.28+445T="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS671720",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000299665.3:c.28+445T="
          },
          "RefSeq": {
            "hgvs": "NM_080387.5:c.28+445T="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000299665.2:n.28+445T="
          },
          "RefSeq": {
            "hgvs": "NP_525126.2:n.28+445T="
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}