{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1984826663",
  "communityStandardTitle": [
    "NM_001098816.3(TENM4):c.4100C= (p.Thr1367=)"
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/763485258",
        "rs": 763485258
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "G",
          "end": 78708470,
          "referenceAllele": "G",
          "start": 78708469
        }
      ],
      "hgvs": [
        "NC_000011.10:g.78708470G=",
        "CM000673.2:g.78708470G="
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000059"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "G",
          "end": 78419515,
          "referenceAllele": "G",
          "start": 78419514
        }
      ],
      "hgvs": [
        "NC_000011.9:g.78419515G=",
        "CM000673.1:g.78419515G="
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000035"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "G",
          "end": 78097163,
          "referenceAllele": "G",
          "start": 78097162
        }
      ],
      "hgvs": [
        "NC_000011.8:g.78097163G="
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000011"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 737182,
          "referenceAllele": "C",
          "start": 737181
        }
      ],
      "hgvs": [
        "NG_051803.1:g.737182C="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS617061"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4942,
          "referenceAllele": "C",
          "start": 4941
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "ENST00000278550.12:c.4100C="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000278550.7:p.Thr1367="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS743488",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000278550.12:c.4100C="
          },
          "RefSeq": {
            "hgvs": "NM_001098816.3:c.4100C="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000278550.7:p.Thr1367="
          },
          "RefSeq": {
            "hgvs": "NP_001092286.2:p.Thr1367="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4563,
          "referenceAllele": "C",
          "start": 4562
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "ENST00000278550.11:c.4100C="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000278550.7:p.Thr1367="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS252807"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4366,
          "referenceAllele": "C",
          "start": 4365
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "ENST00000612046.4:c.4100C="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000483150.1:p.Thr1367="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS401131"
    },
    {
      "@id": "http://reg.genome.network/allele/PA3078078165",
      "coordinates": [
        {
          "allele": "C",
          "end": 4563,
          "referenceAllele": "C",
          "start": 4562
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "NM_001098816.2:c.4100C="
      ],
      "proteinEffect": {
        "hgvs": "NP_001092286.2:p.Thr1367="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS010687"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4777,
          "referenceAllele": "C",
          "start": 4776
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544924.1:c.4148C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543226.1:p.Thr1383="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111834"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4921,
          "referenceAllele": "C",
          "start": 4920
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544925.1:c.4148C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543227.1:p.Thr1383="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111835"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4756,
          "referenceAllele": "C",
          "start": 4755
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544927.1:c.4127C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543229.1:p.Thr1376="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111836"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4874,
          "referenceAllele": "C",
          "start": 4873
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544928.1:c.4073C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543230.1:p.Thr1358="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111837"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4678,
          "referenceAllele": "C",
          "start": 4677
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544929.1:c.4049C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543231.1:p.Thr1350="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111838"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 5085,
          "referenceAllele": "C",
          "start": 5084
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544930.1:c.3944C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543232.1:p.Thr1315="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111839"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 3004,
          "referenceAllele": "C",
          "start": 3003
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544931.1:c.2987C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543233.1:p.Thr996="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111840"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1813,
          "referenceAllele": "C",
          "start": 1812
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544932.1:c.1601C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543234.1:p.Thr534="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111841"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1656,
          "referenceAllele": "C",
          "start": 1655
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544933.1:c.1544C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543235.1:p.Thr515="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111842"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 129,
          "referenceAllele": "C",
          "start": 128
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544934.1:c.-2C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543236.1:n.-2C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111843"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 1660,
          "referenceAllele": "C",
          "start": 1659
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544933.3:c.1544C="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543235.1:p.Thr515="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS555854"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 4834,
          "referenceAllele": "C",
          "start": 4833
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_017017525.1:c.4175C="
      ],
      "proteinEffect": {
        "hgvs": "XP_016873014.1:p.Thr1392="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS569699"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 5739,
          "referenceAllele": "C",
          "start": 5738
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_017017526.1:c.4100C="
      ],
      "proteinEffect": {
        "hgvs": "XP_016873015.1:p.Thr1367="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS569700"
    },
    {
      "@id": "http://reg.genome.network/allele/PA3078078165",
      "coordinates": [
        {
          "allele": "C",
          "end": 4942,
          "referenceAllele": "C",
          "start": 4941
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "NM_001098816.3:c.4100C="
      ],
      "proteinEffect": {
        "hgvs": "NP_001092286.2:p.Thr1367="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS676486",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000278550.12:c.4100C="
          },
          "RefSeq": {
            "hgvs": "NM_001098816.3:c.4100C="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000278550.7:p.Thr1367="
          },
          "RefSeq": {
            "hgvs": "NP_001092286.2:p.Thr1367="
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}