{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1984821472",
  "communityStandardTitle": [
    "NM_001098816.3(TENM4):c.4324G= (p.Ala1442=)"
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/375681722",
        "rs": 375681722
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "C",
          "end": 78702289,
          "referenceAllele": "C",
          "start": 78702288
        }
      ],
      "hgvs": [
        "NC_000011.10:g.78702289C=",
        "CM000673.2:g.78702289C="
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000059"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "C",
          "end": 78413334,
          "referenceAllele": "C",
          "start": 78413333
        }
      ],
      "hgvs": [
        "NC_000011.9:g.78413334C=",
        "CM000673.1:g.78413334C="
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000035"
    },
    {
      "chromosome": "11",
      "coordinates": [
        {
          "allele": "C",
          "end": 78090982,
          "referenceAllele": "C",
          "start": 78090981
        }
      ],
      "hgvs": [
        "NC_000011.8:g.78090982C="
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000011"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 743363,
          "referenceAllele": "G",
          "start": 743362
        }
      ],
      "hgvs": [
        "NG_051803.1:g.743363G="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS617061"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5166,
          "referenceAllele": "G",
          "start": 5165
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "ENST00000278550.12:c.4324G="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000278550.7:p.Ala1442="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS743488",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000278550.12:c.4324G="
          },
          "RefSeq": {
            "hgvs": "NM_001098816.3:c.4324G="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000278550.7:p.Ala1442="
          },
          "RefSeq": {
            "hgvs": "NP_001092286.2:p.Ala1442="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 4787,
          "referenceAllele": "G",
          "start": 4786
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "ENST00000278550.11:c.4324G="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000278550.7:p.Ala1442="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS252807"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 4590,
          "referenceAllele": "G",
          "start": 4589
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "ENST00000612046.4:c.4324G="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000483150.1:p.Ala1442="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS401131"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825534319",
      "coordinates": [
        {
          "allele": "G",
          "end": 4787,
          "referenceAllele": "G",
          "start": 4786
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "NM_001098816.2:c.4324G="
      ],
      "proteinEffect": {
        "hgvs": "NP_001092286.2:p.Ala1442="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS010687"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5001,
          "referenceAllele": "G",
          "start": 5000
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544924.1:c.4372G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543226.1:p.Ala1458="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111834"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5145,
          "referenceAllele": "G",
          "start": 5144
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544925.1:c.4372G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543227.1:p.Ala1458="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111835"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 4980,
          "referenceAllele": "G",
          "start": 4979
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544927.1:c.4351G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543229.1:p.Ala1451="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111836"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5098,
          "referenceAllele": "G",
          "start": 5097
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544928.1:c.4297G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543230.1:p.Ala1433="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111837"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 4902,
          "referenceAllele": "G",
          "start": 4901
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544929.1:c.4273G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543231.1:p.Ala1425="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111838"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5309,
          "referenceAllele": "G",
          "start": 5308
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544930.1:c.4168G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543232.1:p.Ala1390="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111839"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 3228,
          "referenceAllele": "G",
          "start": 3227
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544931.1:c.3211G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543233.1:p.Ala1071="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111840"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 2037,
          "referenceAllele": "G",
          "start": 2036
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544932.1:c.1825G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543234.1:p.Ala609="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111841"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 1880,
          "referenceAllele": "G",
          "start": 1879
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544933.1:c.1768G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543235.1:p.Ala590="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111842"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 353,
          "referenceAllele": "G",
          "start": 352
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544934.1:c.223G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543236.1:p.Ala75="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS111843"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 1884,
          "referenceAllele": "G",
          "start": 1883
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_011544933.3:c.1768G="
      ],
      "proteinEffect": {
        "hgvs": "XP_011543235.1:p.Ala590="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS555854"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5058,
          "referenceAllele": "G",
          "start": 5057
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_017017525.1:c.4399G="
      ],
      "proteinEffect": {
        "hgvs": "XP_016873014.1:p.Ala1467="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS569699"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 5963,
          "referenceAllele": "G",
          "start": 5962
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "XM_017017526.1:c.4324G="
      ],
      "proteinEffect": {
        "hgvs": "XP_016873015.1:p.Ala1442="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS569700"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825534319",
      "coordinates": [
        {
          "allele": "G",
          "end": 5166,
          "referenceAllele": "G",
          "start": 5165
        }
      ],
      "gene": "http://reg.genome.network/gene/GN029945",
      "geneNCBI_id": 26011,
      "geneSymbol": "TENM4",
      "hgvs": [
        "NM_001098816.3:c.4324G="
      ],
      "proteinEffect": {
        "hgvs": "NP_001092286.2:p.Ala1442="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS676486",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000278550.12:c.4324G="
          },
          "RefSeq": {
            "hgvs": "NM_001098816.3:c.4324G="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000278550.7:p.Ala1442="
          },
          "RefSeq": {
            "hgvs": "NP_001092286.2:p.Ala1442="
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}