{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1876852574",
  "communityStandardTitle": [
    "NM_005658.5(TRAF1):c.141-149G="
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1930780",
        "rs": 1930780
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "9",
      "coordinates": [
        {
          "allele": "C",
          "end": 120923941,
          "referenceAllele": "C",
          "start": 120923940
        }
      ],
      "hgvs": [
        "NC_000009.12:g.120923941C=",
        "CM000671.2:g.120923941C="
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000057"
    },
    {
      "chromosome": "9",
      "coordinates": [
        {
          "allele": "C",
          "end": 123686219,
          "referenceAllele": "C",
          "start": 123686218
        }
      ],
      "hgvs": [
        "NC_000009.11:g.123686219C=",
        "CM000671.1:g.123686219C="
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000033"
    },
    {
      "chromosome": "9",
      "coordinates": [
        {
          "allele": "C",
          "end": 122726040,
          "referenceAllele": "C",
          "start": 122726039
        }
      ],
      "hgvs": [
        "NC_000009.10:g.122726040C="
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000009"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 10233,
          "referenceAllele": "G",
          "start": 10232
        }
      ],
      "hgvs": [
        "NG_023346.1:g.10233G="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS003812"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 613,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 613,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "ENST00000373887.8:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000362994.3:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS751334",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000373887.8:c.141-149G="
          },
          "RefSeq": {
            "hgvs": "NM_005658.5:c.141-149G="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000362994.3:n.141-149G="
          },
          "RefSeq": {
            "hgvs": "NP_005649.1:n.141-149G="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 2586,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 2586,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "ENST00000373887.7:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000362994.3:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS269948"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 565,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 565,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "ENST00000540010.1:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000443183.1:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS362170"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 565,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 565,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "NM_001190945.1:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "NP_001177874.1:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS016263"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 712,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 712,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "NM_005658.4:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "NP_005649.1:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS030744"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 613,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 613,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "NM_005658.5:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "NP_005649.1:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS667077",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000373887.8:c.141-149G="
          },
          "RefSeq": {
            "hgvs": "NM_005658.5:c.141-149G="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000362994.3:n.141-149G="
          },
          "RefSeq": {
            "hgvs": "NP_005649.1:n.141-149G="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 563,
          "endIntronDirection": "-",
          "endIntronOffset": 148,
          "referenceAllele": "G",
          "start": 563,
          "startIntronDirection": "-",
          "startIntronOffset": 149
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012031",
      "geneNCBI_id": 7185,
      "geneSymbol": "TRAF1",
      "hgvs": [
        "NM_001190945.2:c.141-149G="
      ],
      "proteinEffect": {
        "hgvs": "NP_001177874.1:n.141-149G="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS713697"
    }
  ],
  "type": "nucleotide"
}