{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1809870539",
  "communityStandardTitle": [
    "NM_003301.7(TRHR):c.789+9321A>T"
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/16892496",
        "rs": 16892496
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "8",
      "coordinates": [
        {
          "allele": "T",
          "end": 109097622,
          "referenceAllele": "A",
          "start": 109097621
        }
      ],
      "hgvs": [
        "NC_000008.11:g.109097622A>T",
        "CM000670.2:g.109097622A>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000056"
    },
    {
      "chromosome": "8",
      "coordinates": [
        {
          "allele": "T",
          "end": 110109851,
          "referenceAllele": "A",
          "start": 110109850
        }
      ],
      "hgvs": [
        "NC_000008.10:g.110109851A>T",
        "CM000670.1:g.110109851A>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000032"
    },
    {
      "chromosome": "8",
      "coordinates": [
        {
          "allele": "T",
          "end": 110179027,
          "referenceAllele": "A",
          "start": 110179026
        }
      ],
      "hgvs": [
        "NC_000008.9:g.110179027A>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000008"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 15176,
          "referenceAllele": "A",
          "start": 15175
        }
      ],
      "hgvs": [
        "NG_017161.1:g.15176A>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS003431"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1176,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 1176,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "ENST00000518632.2:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000430711.2:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS758615",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000518632.2:c.789+9321A>T"
          },
          "RefSeq": {
            "hgvs": "NM_003301.7:c.789+9321A>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000430711.2:n.789+9321A>T"
          },
          "RefSeq": {
            "hgvs": "NP_003292.1:n.789+9321A>T"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 878,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 878,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "ENST00000311762.2:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000309818.2:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS256575"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1140,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 1140,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "ENST00000518632.1:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000430711.1:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS346040"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 878,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 878,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "NM_003301.5:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_003292.1:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS028552"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1419,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 1419,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "XM_011517263.1:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515565.1:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS084462"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2016,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 2016,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "XM_011517263.2:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515565.1:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS544480"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1176,
          "endIntronDirection": "+",
          "endIntronOffset": 9321,
          "referenceAllele": "A",
          "start": 1176,
          "startIntronDirection": "+",
          "startIntronOffset": 9320
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012299",
      "geneNCBI_id": 7201,
      "geneSymbol": "TRHR",
      "hgvs": [
        "NM_003301.7:c.789+9321A>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_003292.1:n.789+9321A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS695783",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000518632.2:c.789+9321A>T"
          },
          "RefSeq": {
            "hgvs": "NM_003301.7:c.789+9321A>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000430711.2:n.789+9321A>T"
          },
          "RefSeq": {
            "hgvs": "NP_003292.1:n.789+9321A>T"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}