{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1677106697",
  "communityStandardTitle": [
    "NM_005577.4(LPA):c.5735+716A>T"
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/6919346",
        "rs": 6919346
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "A",
          "end": 160539327,
          "referenceAllele": "T",
          "start": 160539326
        }
      ],
      "hgvs": [
        "NC_000006.12:g.160539327T>A",
        "CM000668.2:g.160539327T>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000054"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "A",
          "end": 160960359,
          "referenceAllele": "T",
          "start": 160960358
        }
      ],
      "hgvs": [
        "NC_000006.11:g.160960359T>A",
        "CM000668.1:g.160960359T>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000030"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "A",
          "end": 160880349,
          "referenceAllele": "T",
          "start": 160880348
        }
      ],
      "hgvs": [
        "NC_000006.10:g.160880349T>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000006"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 132049,
          "referenceAllele": "A",
          "start": 132048
        }
      ],
      "hgvs": [
        "NG_016147.1:g.132049A>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS002977"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 5796,
          "endIntronDirection": "+",
          "endIntronOffset": 716,
          "referenceAllele": "A",
          "start": 5796,
          "startIntronDirection": "+",
          "startIntronOffset": 715
        }
      ],
      "gene": "http://reg.genome.network/gene/GN006667",
      "geneNCBI_id": 4018,
      "geneSymbol": "LPA",
      "hgvs": [
        "ENST00000316300.10:c.5735+716A>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000321334.6:n.5735+716A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS746046",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000316300.10:c.5735+716A>T"
          },
          "RefSeq": {
            "hgvs": "NM_005577.4:c.5735+716A>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000321334.6:n.5735+716A>T"
          },
          "RefSeq": {
            "hgvs": "NP_005568.2:n.5735+716A>T"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 5780,
          "endIntronDirection": "+",
          "endIntronOffset": 716,
          "referenceAllele": "A",
          "start": 5780,
          "startIntronDirection": "+",
          "startIntronOffset": 715
        }
      ],
      "gene": "http://reg.genome.network/gene/GN006667",
      "geneNCBI_id": 4018,
      "geneSymbol": "LPA",
      "hgvs": [
        "ENST00000316300.9:c.5735+716A>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000321334.5:n.5735+716A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS257202"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 5855,
          "endIntronDirection": "+",
          "endIntronOffset": 716,
          "referenceAllele": "A",
          "start": 5855,
          "startIntronDirection": "+",
          "startIntronOffset": 715
        }
      ],
      "gene": "http://reg.genome.network/gene/GN006667",
      "geneNCBI_id": 4018,
      "geneSymbol": "LPA",
      "hgvs": [
        "NM_005577.2:c.5735+716A>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_005568.2:n.5735+716A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS030667"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 5780,
          "endIntronDirection": "+",
          "endIntronOffset": 716,
          "referenceAllele": "A",
          "start": 5780,
          "startIntronDirection": "+",
          "startIntronOffset": 715
        }
      ],
      "gene": "http://reg.genome.network/gene/GN006667",
      "geneNCBI_id": 4018,
      "geneSymbol": "LPA",
      "hgvs": [
        "NM_005577.3:c.5735+716A>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_005568.2:n.5735+716A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS525326"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 5796,
          "endIntronDirection": "+",
          "endIntronOffset": 716,
          "referenceAllele": "A",
          "start": 5796,
          "startIntronDirection": "+",
          "startIntronOffset": 715
        }
      ],
      "gene": "http://reg.genome.network/gene/GN006667",
      "geneNCBI_id": 4018,
      "geneSymbol": "LPA",
      "hgvs": [
        "NM_005577.4:c.5735+716A>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_005568.2:n.5735+716A>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696458",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000316300.10:c.5735+716A>T"
          },
          "RefSeq": {
            "hgvs": "NM_005577.4:c.5735+716A>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000321334.6:n.5735+716A>T"
          },
          "RefSeq": {
            "hgvs": "NP_005568.2:n.5735+716A>T"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}