{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA16617501",
  "communityStandardTitle": [
    "NM_004369.4(COL6A3):c.6167G>A (p.Gly2056Glu)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=405668[alleleid]",
        "alleleId": 405668,
        "preferredName": "NM_004369.4(COL6A3):c.6167G>A (p.Gly2056Glu)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/422102",
        "RCV": [
          "RCV000486882",
          "RCV000800319"
        ],
        "variationId": 422102
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr2:g.238269807C>T?assembly=hg19",
        "id": "chr2:g.238269807C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr2:g.237361164C>T?assembly=hg38",
        "id": "chr2:g.237361164C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1064795558",
        "rs": 1064795558
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "T",
          "end": 237361164,
          "referenceAllele": "C",
          "start": 237361163
        }
      ],
      "hgvs": [
        "NC_000002.12:g.237361164C>T",
        "CM000664.2:g.237361164C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000050"
    },
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "T",
          "end": 238269807,
          "referenceAllele": "C",
          "start": 238269806
        }
      ],
      "hgvs": [
        "NC_000002.11:g.238269807C>T",
        "CM000664.1:g.238269807C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000026"
    },
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "T",
          "end": 237934546,
          "referenceAllele": "C",
          "start": 237934545
        }
      ],
      "hgvs": [
        "NC_000002.10:g.237934546C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000002"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 58044,
          "referenceAllele": "G",
          "start": 58043
        }
      ],
      "hgvs": [
        "NG_008676.1:g.58044G>A",
        "LRG_473:g.58044G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001161"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5799,
          "referenceAllele": "G",
          "start": 5798
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000353578.9:c.5549G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000315873.4:p.Gly1850Glu",
        "hgvsWellDefined": "ENSP00000315873.4:p.Gly1850Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS824068"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 6409,
          "referenceAllele": "G",
          "start": 6408
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000295550.9:c.6167G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000295550.4:p.Gly2056Glu",
        "hgvsWellDefined": "ENSP00000295550.4:p.Gly2056Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS744301",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000295550.9:c.6167G>A"
          },
          "RefSeq": {
            "hgvs": "NM_004369.4:c.6167G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000295550.4:p.Gly2056Glu"
          },
          "RefSeq": {
            "hgvs": "NP_004360.2:p.Gly2056Glu"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 6620,
          "referenceAllele": "G",
          "start": 6619
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000295550.8:c.6167G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000295550.4:p.Gly2056Glu",
        "hgvsWellDefined": "ENSP00000295550.4:p.Gly2056Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS254109"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4572,
          "referenceAllele": "G",
          "start": 4571
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000347401.7:c.4346G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000315609.4:p.Gly1449Glu",
        "hgvsWellDefined": "ENSP00000315609.4:p.Gly1449Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS262355"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5834,
          "referenceAllele": "G",
          "start": 5833
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000353578.8:c.5549G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000315873.4:p.Gly1850Glu",
        "hgvsWellDefined": "ENSP00000315873.4:p.Gly1850Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS262979"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5549,
          "referenceAllele": "G",
          "start": 5548
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000409809.5:c.5549G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000386844.1:p.Gly1850Glu",
        "hgvsWellDefined": "ENSP00000386844.1:p.Gly1850Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS281868"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4572,
          "referenceAllele": "G",
          "start": 4571
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "ENST00000472056.5:c.4346G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000418285.1:p.Gly1449Glu",
        "hgvsWellDefined": "ENSP00000418285.1:p.Gly1449Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS314119"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645455417",
      "coordinates": [
        {
          "allele": "A",
          "end": 6452,
          "referenceAllele": "G",
          "start": 6451
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_004369.3:c.6167G>A",
        "LRG_473t1:c.6167G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_004360.2:p.Gly2056Glu",
        "hgvsWellDefined": "NP_004360.2:p.Gly2056Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS029533"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830147788",
      "coordinates": [
        {
          "allele": "A",
          "end": 4631,
          "referenceAllele": "G",
          "start": 4630
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057166.4:c.4346G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476507.3:p.Gly1449Glu",
        "hgvsWellDefined": "NP_476507.3:p.Gly1449Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040059"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830150069",
      "coordinates": [
        {
          "allele": "A",
          "end": 5834,
          "referenceAllele": "G",
          "start": 5833
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057167.3:c.5549G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476508.2:p.Gly1850Glu",
        "hgvsWellDefined": "NP_476508.2:p.Gly1850Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040060"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5809,
          "referenceAllele": "G",
          "start": 5808
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_005246065.1:c.5567G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005246122.1:p.Gly1856Glu",
        "hgvsWellDefined": "XP_005246122.1:p.Gly1856Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS057455"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4955,
          "referenceAllele": "G",
          "start": 4954
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_005246066.1:c.4946G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_005246123.1:p.Gly1649Glu",
        "hgvsWellDefined": "XP_005246123.1:p.Gly1649Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS057456"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5908,
          "referenceAllele": "G",
          "start": 5907
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_006712253.1:c.5666G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_006712316.1:p.Gly1889Glu",
        "hgvsWellDefined": "XP_006712316.1:p.Gly1889Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS069545"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 6406,
          "referenceAllele": "G",
          "start": 6405
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_011510574.1:c.6164G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011508876.1:p.Gly2055Glu",
        "hgvsWellDefined": "XP_011508876.1:p.Gly2055Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS077837"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4209,
          "referenceAllele": "G",
          "start": 4208
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_011510575.1:c.3761G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011508877.1:p.Gly1254Glu",
        "hgvsWellDefined": "XP_011508877.1:p.Gly1254Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS077838"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 4671,
          "referenceAllele": "G",
          "start": 4670
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_017003304.1:c.3761G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016858793.1:p.Gly1254Glu",
        "hgvsWellDefined": "XP_016858793.1:p.Gly1254Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS559074"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 5157,
          "referenceAllele": "G",
          "start": 5156
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "XM_024452684.1:c.4946G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_024308452.1:p.Gly1649Glu",
        "hgvsWellDefined": "XP_024308452.1:p.Gly1649Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS586075"
    },
    {
      "@id": "http://reg.genome.network/allele/PA645455417",
      "coordinates": [
        {
          "allele": "A",
          "end": 6409,
          "referenceAllele": "G",
          "start": 6408
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_004369.4:c.6167G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_004360.2:p.Gly2056Glu",
        "hgvsWellDefined": "NP_004360.2:p.Gly2056Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS696119",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000295550.9:c.6167G>A"
          },
          "RefSeq": {
            "hgvs": "NM_004369.4:c.6167G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000295550.4:p.Gly2056Glu"
          },
          "RefSeq": {
            "hgvs": "NP_004360.2:p.Gly2056Glu"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830147788",
      "coordinates": [
        {
          "allele": "A",
          "end": 4588,
          "referenceAllele": "G",
          "start": 4587
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057166.5:c.4346G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476507.3:p.Gly1449Glu",
        "hgvsWellDefined": "NP_476507.3:p.Gly1449Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699474"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830150069",
      "coordinates": [
        {
          "allele": "A",
          "end": 5791,
          "referenceAllele": "G",
          "start": 5790
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002213",
      "geneNCBI_id": 1293,
      "geneSymbol": "COL6A3",
      "hgvs": [
        "NM_057167.4:c.5549G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_476508.2:p.Gly1850Glu",
        "hgvsWellDefined": "NP_476508.2:p.Gly1850Glu"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS729011"
    }
  ],
  "type": "nucleotide"
}