{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA16605528",
  "communityStandardTitle": [
    "NM_080680.3(COL11A2):c.2179G>T (p.Gly727Ter)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=370409[alleleid]",
        "alleleId": 370409,
        "preferredName": "NM_080680.3(COL11A2):c.2179G>T (p.Gly727Ter)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/391804",
        "RCV": [
          "RCV000425711"
        ],
        "variationId": 391804
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr6:g.33144071C>A?assembly=hg19",
        "id": "chr6:g.33144071C>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr6:g.33176294C>A?assembly=hg38",
        "id": "chr6:g.33176294C>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/768569721",
        "rs": 768569721
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/6-33176294-C-A?dataset=gnomad_r4",
        "id": "6-33176294-C-A",
        "variant": "6:33176294 C / A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "A",
          "end": 33176294,
          "referenceAllele": "C",
          "start": 33176293
        }
      ],
      "hgvs": [
        "NC_000006.12:g.33176294C>A",
        "CM000668.2:g.33176294C>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000054"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "A",
          "end": 33144071,
          "referenceAllele": "C",
          "start": 33144070
        }
      ],
      "hgvs": [
        "NC_000006.11:g.33144071C>A",
        "CM000668.1:g.33144071C>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000030"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "A",
          "end": 33252049,
          "referenceAllele": "C",
          "start": 33252048
        }
      ],
      "hgvs": [
        "NC_000006.10:g.33252049C>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000006"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 21175,
          "referenceAllele": "G",
          "start": 21174
        }
      ],
      "hgvs": [
        "NG_011589.1:g.21175G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS001838"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 752,
          "referenceAllele": "G",
          "start": 751
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "ENST00000361917.6:c.752G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS824170"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2406,
          "referenceAllele": "G",
          "start": 2405
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "ENST00000341947.7:c.2179G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000339915.2:p.Gly727Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS748030",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000341947.7:c.2179G>T"
          },
          "RefSeq": {
            "hgvs": "NM_080680.3:c.2179G>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000339915.2:p.Gly727Ter"
          },
          "RefSeq": {
            "hgvs": "NP_542411.2:p.Gly727Ter"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2407,
          "referenceAllele": "G",
          "start": 2406
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "ENST00000341947.6:c.2179G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000339915.2:p.Gly727Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS261444"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2086,
          "referenceAllele": "G",
          "start": 2085
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "ENST00000361917.5:c.1858G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000355123.1:p.Gly620Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS265710"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2180,
          "referenceAllele": "G",
          "start": 2179
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "ENST00000374708.8:c.1921G>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000363840.4:p.Gly641Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS270371"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 272,
          "endIntronDirection": "+",
          "endIntronOffset": 715,
          "referenceAllele": "G",
          "start": 272,
          "startIntronDirection": "+",
          "startIntronOffset": 714
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "ENST00000477772.1:n.272+715G>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS318515"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2086,
          "referenceAllele": "G",
          "start": 2085
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "NM_080679.2:c.1858G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_542410.2:p.Gly620Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040241"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2407,
          "referenceAllele": "G",
          "start": 2406
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "NM_080680.2:c.2179G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_542411.2:p.Gly727Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040242"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2149,
          "referenceAllele": "G",
          "start": 2148
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "NM_080681.2:c.1921G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_542412.2:p.Gly641Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040243"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2225,
          "referenceAllele": "G",
          "start": 2224
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514298.1:c.1333G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512600.1:p.Gly445Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS081523"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1701,
          "referenceAllele": "G",
          "start": 1700
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514299.1:c.1465G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512601.1:p.Gly489Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS081524"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1521,
          "referenceAllele": "G",
          "start": 1520
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514300.1:c.1285G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512602.1:p.Gly429Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS081525"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1458,
          "referenceAllele": "G",
          "start": 1457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514301.1:c.1222G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512603.1:p.Gly408Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS081526"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1700,
          "referenceAllele": "G",
          "start": 1699
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514302.1:c.1066G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512604.1:p.Gly356Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS081527"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1698,
          "referenceAllele": "G",
          "start": 1697
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514299.2:c.1465G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512601.1:p.Gly489Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS543262"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1518,
          "referenceAllele": "G",
          "start": 1517
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514300.2:c.1285G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512602.1:p.Gly429Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS543263"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1719,
          "referenceAllele": "G",
          "start": 1718
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_011514302.2:c.1066G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011512604.1:p.Gly356Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS543264"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2672,
          "referenceAllele": "G",
          "start": 2671
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_017010250.1:c.2179G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016865739.1:p.Gly727Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS564355"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1561,
          "referenceAllele": "G",
          "start": 1560
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "XM_017010251.2:c.997G>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016865740.1:p.Gly333Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS564356"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2406,
          "referenceAllele": "G",
          "start": 2405
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "NM_080680.3:c.2179G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_542411.2:p.Gly727Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699534",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000341947.7:c.2179G>T"
          },
          "RefSeq": {
            "hgvs": "NM_080680.3:c.2179G>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000339915.2:p.Gly727Ter"
          },
          "RefSeq": {
            "hgvs": "NP_542411.2:p.Gly727Ter"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2148,
          "referenceAllele": "G",
          "start": 2147
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "NM_080681.3:c.1921G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_542412.2:p.Gly641Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS699535"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2085,
          "referenceAllele": "G",
          "start": 2084
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002187",
      "geneNCBI_id": 1302,
      "geneSymbol": "COL11A2",
      "hgvs": [
        "NM_080679.3:c.1858G>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_542410.2:p.Gly620Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS729056"
    }
  ],
  "type": "nucleotide"
}