{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1608170557",
  "communityStandardTitle": [
    "NM_004271.4(LY86):c.137-14550C="
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/7740529",
        "rs": 7740529
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "C",
          "end": 6610376,
          "referenceAllele": "C",
          "start": 6610375
        }
      ],
      "hgvs": [
        "NC_000006.12:g.6610376C=",
        "CM000668.2:g.6610376C="
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000054"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "C",
          "end": 6610609,
          "referenceAllele": "C",
          "start": 6610608
        }
      ],
      "hgvs": [
        "NC_000006.11:g.6610609C=",
        "CM000668.1:g.6610609C="
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000030"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "C",
          "end": 6555608,
          "referenceAllele": "C",
          "start": 6555607
        }
      ],
      "hgvs": [
        "NC_000006.10:g.6555608C="
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000006"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 151,
          "endIntronDirection": "-",
          "endIntronOffset": 14549,
          "referenceAllele": "C",
          "start": 151,
          "startIntronDirection": "-",
          "startIntronOffset": 14550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN016837",
      "geneNCBI_id": 9450,
      "geneSymbol": "LY86",
      "hgvs": [
        "ENST00000230568.5:c.137-14550C="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000230568.3:n.137-14550C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS740835",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000230568.5:c.137-14550C="
          },
          "RefSeq": {
            "hgvs": "NM_004271.4:c.137-14550C="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000230568.3:n.137-14550C="
          },
          "RefSeq": {
            "hgvs": "NP_004262.1:n.137-14550C="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 202,
          "endIntronDirection": "-",
          "endIntronOffset": 14549,
          "referenceAllele": "C",
          "start": 202,
          "startIntronDirection": "-",
          "startIntronOffset": 14550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN016837",
      "geneNCBI_id": 9450,
      "geneSymbol": "LY86",
      "hgvs": [
        "ENST00000230568.4:c.137-14550C="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000230568.3:n.137-14550C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS248756"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 488,
          "endIntronDirection": "-",
          "endIntronOffset": 14549,
          "referenceAllele": "C",
          "start": 488,
          "startIntronDirection": "-",
          "startIntronOffset": 14550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN016837",
      "geneNCBI_id": 9450,
      "geneSymbol": "LY86",
      "hgvs": [
        "ENST00000379953.6:c.137-14550C="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000369286.1:n.137-14550C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS272711"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 170,
          "endIntronDirection": "-",
          "endIntronOffset": 14549,
          "referenceAllele": "C",
          "start": 170,
          "startIntronDirection": "-",
          "startIntronOffset": 14550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN016837",
      "geneNCBI_id": 9450,
      "geneSymbol": "LY86",
      "hgvs": [
        "NM_004271.3:c.137-14550C="
      ],
      "proteinEffect": {
        "hgvs": "NP_004262.1:n.137-14550C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS029440"
    },
    {
      "coordinates": [
        {
          "allele": "G",
          "end": 195,
          "endIntronDirection": "+",
          "endIntronOffset": 12256,
          "referenceAllele": "G",
          "start": 195,
          "startIntronDirection": "+",
          "startIntronOffset": 12255
        }
      ],
      "gene": "http://reg.genome.network/gene/GN026593",
      "geneNCBI_id": 285780,
      "geneSymbol": "LY86-AS1",
      "hgvs": [
        "NR_026970.1:n.195+12256G="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS047422"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 232,
          "endIntronDirection": "-",
          "endIntronOffset": 14549,
          "referenceAllele": "C",
          "start": 232,
          "startIntronDirection": "-",
          "startIntronOffset": 14550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN016837",
      "geneNCBI_id": 9450,
      "geneSymbol": "LY86",
      "hgvs": [
        "XM_017011505.1:c.137-14550C="
      ],
      "proteinEffect": {
        "hgvs": "XP_016866994.1:n.137-14550C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS565338"
    },
    {
      "coordinates": [
        {
          "allele": "C",
          "end": 151,
          "endIntronDirection": "-",
          "endIntronOffset": 14549,
          "referenceAllele": "C",
          "start": 151,
          "startIntronDirection": "-",
          "startIntronOffset": 14550
        }
      ],
      "gene": "http://reg.genome.network/gene/GN016837",
      "geneNCBI_id": 9450,
      "geneSymbol": "LY86",
      "hgvs": [
        "NM_004271.4:c.137-14550C="
      ],
      "proteinEffect": {
        "hgvs": "NP_004262.1:n.137-14550C="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS666397",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000230568.5:c.137-14550C="
          },
          "RefSeq": {
            "hgvs": "NM_004271.4:c.137-14550C="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000230568.3:n.137-14550C="
          },
          "RefSeq": {
            "hgvs": "NP_004262.1:n.137-14550C="
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}