{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA16043378",
  "communityStandardTitle": [
    "NM_001365536.1(SCN9A):c.1642C>T (p.Arg548Ter)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=360823[alleleid]",
        "alleleId": 360823,
        "preferredName": "NM_001365536.1(SCN9A):c.1642C>T (p.Arg548Ter)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/374104",
        "RCV": [
          "RCV000414858",
          "RCV000824563",
          "RCV002263668"
        ],
        "variationId": 374104
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr2:g.167141295G>A?assembly=hg19",
        "id": "chr2:g.167141295G>A"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr2:g.166284785G>A?assembly=hg38",
        "id": "chr2:g.166284785G>A"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/1057518900",
        "rs": 1057518900
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/2-167141295-G-A?dataset=gnomad_r2_1",
        "id": "2-167141295-G-A",
        "variant": "2:167141295 G / A"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/2-166284785-G-A?dataset=gnomad_r3",
        "id": "2-166284785-G-A",
        "variant": "2:166284785 G / A"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/2-166284785-G-A?dataset=gnomad_r4",
        "id": "2-166284785-G-A",
        "variant": "2:166284785 G / A"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "A",
          "end": 166284785,
          "referenceAllele": "G",
          "start": 166284784
        }
      ],
      "hgvs": [
        "NC_000002.12:g.166284785G>A",
        "CM000664.2:g.166284785G>A"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000050"
    },
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "A",
          "end": 167141295,
          "referenceAllele": "G",
          "start": 167141294
        }
      ],
      "hgvs": [
        "NC_000002.11:g.167141295G>A",
        "CM000664.1:g.167141295G>A"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000026"
    },
    {
      "chromosome": "2",
      "coordinates": [
        {
          "allele": "A",
          "end": 166849541,
          "referenceAllele": "G",
          "start": 166849540
        }
      ],
      "hgvs": [
        "NC_000002.10:g.166849541G>A"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000002"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 96203,
          "referenceAllele": "C",
          "start": 96202
        }
      ],
      "hgvs": [
        "NG_012798.1:g.96203C>T",
        "LRG_369:g.96203C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS002537"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1890,
          "referenceAllele": "C",
          "start": 1889
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000303354.11:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000304748.7:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS745024"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1642,
          "referenceAllele": "C",
          "start": 1641
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000409435.6:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000386330.2:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS754301"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1965,
          "referenceAllele": "C",
          "start": 1964
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000454569.6:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000413212.2:p.Arg548Ter",
        "hgvsWellDefined": "ENSP00000413212.2:p.Arg548_Asn832delinsSerSerArgThrSerLeuPheSerPheLysGlyArgGlyArgAspIleGlySerGluThrGluPheAlaAspAspGluHisSerIlePheGlyAspAsnGluSerArgArgGlySerLeuPheValProHisArgProGlnGluArgArgSerSerAsnIleSerGlnAlaSerArgSerProProMetLeuProValAsnGlyLysMetHisSerAlaValAspCysAsnGlyValValSerLeuValAspGlyArgSerAlaLeuMetLeuProAsnGlyGlnLeuLeuProGluGlyThrThrAsnGlnIleHisLysLysArgArgCysSerSerTyrLeuLeuSerGluAspMetLeuAsnAspProAsnLeuArgGlnArgAlaMetSerArgAlaSerIleLeuThrAsnThrValGluGluLeuGluGluSerArgGlnLysCysProProTrpTrpTyrArgPheAlaHisLysPheLeuIleTrpAsnCysSerProTyrTrpIleLysPheLysLysCysIleTyrPheIleValMetAspProPheValAspLeuAlaIleThrIleCysIleValLeuAsnThrLeuPheMetAlaMetGluHisHisProMetThrGluGluPheLysAsnValLeuAlaIleGlyAsnLeuValPheThrGlyIlePheAlaAlaGluMetValLeuLysLeuIleAlaMetAspProTyrGluTyrPheGlnValGlyTrpAsnIlePheAspSerLeuIleValThrLeuSerLeuValGluLeuPheLeuAlaAspValGluGlyLeuSerValLeuArgSerPheArgLeuValAsnIleAsnTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS756472"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1940,
          "referenceAllele": "C",
          "start": 1939
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000642356.2:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000495601.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS766697",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000642356.2:c.1642C>T"
          },
          "RefSeq": {
            "hgvs": "NM_001365536.1:c.1642C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000495601.1:p.Arg548Ter"
          },
          "RefSeq": {
            "hgvs": "NP_001352465.1:p.Arg548Ter"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1642,
          "referenceAllele": "C",
          "start": 1641
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000644316.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000493939.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS767756"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1890,
          "referenceAllele": "C",
          "start": 1889
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000645907.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000495983.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS768602"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 677,
          "referenceAllele": "C",
          "start": 676
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000667201.2:c.677C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS772970"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1983,
          "referenceAllele": "C",
          "start": 1982
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000303354.10:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000304748.7:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS255307"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1642,
          "referenceAllele": "C",
          "start": 1641
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000409435.5:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000386330.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS281545"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1989,
          "referenceAllele": "C",
          "start": 1988
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000409672.5:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000386306.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS281751"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1237,
          "referenceAllele": "C",
          "start": 1236
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000452182.1:c.1237C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000393141.1:p.Arg413Ter",
        "hgvsWellDefined": "ENSP00000393141.1:p.Arg413Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS301509"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1237,
          "referenceAllele": "C",
          "start": 1236
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "ENST00000454569.5:c.1237C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000413212.1:p.Arg413Ter",
        "hgvsWellDefined": "ENSP00000413212.1:p.Arg413Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS302626"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1983,
          "referenceAllele": "C",
          "start": 1982
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "NM_002977.3:c.1642C>T",
        "LRG_369t1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_002968.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS028260"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1029,
          "endIntronDirection": "+",
          "endIntronOffset": 7538,
          "referenceAllele": "G",
          "start": 1029,
          "startIntronDirection": "+",
          "startIntronOffset": 7537
        }
      ],
      "gene": "http://reg.genome.network/gene/GN054069",
      "geneNCBI_id": 101929680,
      "geneSymbol": "SCN1A-AS1",
      "hgvs": [
        "NR_110260.1:n.1029+7538G>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS054541"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_005246757.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_005246814.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS057779"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1904,
          "referenceAllele": "C",
          "start": 1903
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511616.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509918.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS078877"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511617.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509919.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS078878"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511618.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509920.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS078879"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511619.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509921.1:p.Arg548Ter",
        "hgvsWellDefined": "XP_011509921.1:p.Arg548_Phe1504delinsSerSerArgThrSerLeuPheSerPheLysGlyArgGlyArgAspIleGlySerGluThrGluPheAlaAspAspGluHisSerIlePheGlyAspAsnGluSerArgArgGlySerLeuPheValProHisArgProGlnGluArgArgSerSerAsnIleSerGlnAlaSerArgSerProProMetLeuProValAsnGlyLysMetHisSerAlaValAspCysAsnGlyValValSerLeuValAspGlyArgSerAlaLeuMetLeuProAsnGlyGlnLeuLeuProGluValIleIleAspLysAlaThrSerAspAspSerGlyThrThrAsnGlnIleHisLysLysArgArgCysSerSerTyrLeuLeuSerGluAspMetLeuAsnAspProAsnLeuArgGlnArgAlaMetSerArgAlaSerIleLeuThrAsnThrValGluGluLeuGluGluSerArgGlnLysCysProProTrpTrpTyrArgPheAlaHisLysPheLeuIleTrpAsnCysSerProTyrTrpIleLysPheLysLysCysIleTyrPheIleValMetAspProPheValAspLeuAlaIleThrIleCysIleValLeuAsnThrLeuPheMetAlaMetGluHisHisProMetThrGluGluPheLysAsnValLeuAlaIleGlyAsnLeuValPheThrGlyIlePheAlaAlaGluMetValLeuLysLeuIleAlaMetAspProTyrGluTyrPheGlnValGlyTrpAsnIlePheAspSerLeuIleValThrLeuSerLeuValGluLeuPheLeuAlaAspValGluGlyLeuSerValLeuArgSerPheArgLeuLeuArgValPheLysLeuAlaLysSerTrpProThrLeuAsnMetLeuIleLysIleIleGlyAsnSerValGlyAlaLeuGlyAsnLeuThrLeuValLeuAlaIleIleValPheIlePheAlaValValGlyMetGlnLeuPheGlyLysSerTyrLysGluCysValCysLysIleAsnAspAspCysThrLeuProArgTrpHisMetAsnAspPhePheHisSerPheLeuIleValPheArgValLeuCysGlyGluTrpIleGluThrMetTrpAspCysMetGluValAlaGlyGlnAlaMetCysLeuIleValTyrMetMetValMetValIleGlyAsnLeuValValLeuAsnLeuPheLeuAlaLeuLeuLeuSerSerPheSerSerAspAsnLeuThrAlaIleGluGluAspProAspAlaAsnAsnLeuGlnIleAlaValThrArgIleLysLysGlyIleAsnTyrValLysGlnThrLeuArgGluPheIleLeuLysAlaPheSerLysLysProLysIleSerArgGluIleArgGlnAlaGluAspLeuAsnThrLysLysGluAsnTyrIleSerAsnHisThrLeuAlaGluMetSerLysGlyHisAsnPheLeuLysGluLysAspLysIleSerGlyPheGlySerSerValAspLysHisLeuMetGluAspSerAspGlyGlnSerPheIleHisAsnProSerLeuThrValThrValProIleAlaProGlyGluSerAspLeuGluAsnMetAsnAlaGluGluLeuSerSerAspSerAspSerGluTyrSerLysValArgLeuAsnArgSerSerSerSerGluCysSerThrValAspAsnProLeuProGlyGluGlyGluGluAlaGluAlaGluProMetAsnSerAspGluProGluAlaCysPheThrAspGlyCysValTrpArgPheSerCysCysGlnValAsnIleGluSerGlyLysGlyLysIleTrpTrpAsnIleArgLysThrCysTyrLysIleValGluHisSerTrpPheGluSerPheIleValLeuMetIleLeuLeuSerSerGlyAlaLeuAlaPheGluAspIleTyrIleGluArgLysLysThrIleLysIleIleLeuGluTyrAlaAspLysIlePheThrTyrIlePheIleLeuGluMetLeuLeuLysTrpIleAlaTyrGlyTyrLysThrTyrPheThrAsnAlaTrpCysTrpLeuAspPheLeuIleValAspValSerLeuValThrLeuValAlaAsnThrLeuGlyTyrSerAspLeuGlyProIleLysSerLeuArgThrLeuArgAlaLeuArgProLeuArgAlaLeuSerArgPheGluGlyMetArgValValValAsnAlaLeuIleGlyAlaIleProSerIleMetAsnValLeuLeuValCysLeuIlePheTrpLeuIlePheSerIleMetGlyValAsnLeuPheAlaGlyLysPheTyrGluCysIleAsnThrThrAspGlySerArgPheProAlaSerGlnValProAsnArgSerGluCysPheAlaLeuMetAsnValSerGlnAsnValArgTrpLysAsnLeuLysValAsnPheAspAsnValGlyLeuGlyTyrLeuSerLeuLeuGlnValAlaThrPheLysGlyTrpThrIleIleMetTyrAlaAlaValAspSerValAsnValAspLysGlnProLysTyrGluTyrSerLeuTyrMetTyrIleTyrPheValValPheIleIlePheGlySerPhePheThrLeuAsnLeuPheIleGlyValIleIleAspAsnPheAsnGlnGlnLysLysLysLeuGlyGlyGlnAspIlePheMetThrGluGluGlnLysLysTyrTyrAsnAlaMetLysLysLeuGlySerLysLysProGlnLysProIleProArgProGlyValCysPheTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS078880"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1940,
          "referenceAllele": "C",
          "start": 1939
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "NM_001365536.1:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001352465.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS524144",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000642356.2:c.1642C>T"
          },
          "RefSeq": {
            "hgvs": "NM_001365536.1:c.1642C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000495601.1:p.Arg548Ter"
          },
          "RefSeq": {
            "hgvs": "NP_001352465.1:p.Arg548Ter"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1918,
          "referenceAllele": "C",
          "start": 1917
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511616.3:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509918.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS542212"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511617.2:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509919.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS542213"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511618.2:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509920.1:p.Arg548Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS542214"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_011511619.2:c.1642C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011509921.1:p.Arg548Ter",
        "hgvsWellDefined": "XP_011509921.1:p.Arg548_Phe1504delinsSerSerArgThrSerLeuPheSerPheLysGlyArgGlyArgAspIleGlySerGluThrGluPheAlaAspAspGluHisSerIlePheGlyAspAsnGluSerArgArgGlySerLeuPheValProHisArgProGlnGluArgArgSerSerAsnIleSerGlnAlaSerArgSerProProMetLeuProValAsnGlyLysMetHisSerAlaValAspCysAsnGlyValValSerLeuValAspGlyArgSerAlaLeuMetLeuProAsnGlyGlnLeuLeuProGluValIleIleAspLysAlaThrSerAspAspSerGlyThrThrAsnGlnIleHisLysLysArgArgCysSerSerTyrLeuLeuSerGluAspMetLeuAsnAspProAsnLeuArgGlnArgAlaMetSerArgAlaSerIleLeuThrAsnThrValGluGluLeuGluGluSerArgGlnLysCysProProTrpTrpTyrArgPheAlaHisLysPheLeuIleTrpAsnCysSerProTyrTrpIleLysPheLysLysCysIleTyrPheIleValMetAspProPheValAspLeuAlaIleThrIleCysIleValLeuAsnThrLeuPheMetAlaMetGluHisHisProMetThrGluGluPheLysAsnValLeuAlaIleGlyAsnLeuValPheThrGlyIlePheAlaAlaGluMetValLeuLysLeuIleAlaMetAspProTyrGluTyrPheGlnValGlyTrpAsnIlePheAspSerLeuIleValThrLeuSerLeuValGluLeuPheLeuAlaAspValGluGlyLeuSerValLeuArgSerPheArgLeuLeuArgValPheLysLeuAlaLysSerTrpProThrLeuAsnMetLeuIleLysIleIleGlyAsnSerValGlyAlaLeuGlyAsnLeuThrLeuValLeuAlaIleIleValPheIlePheAlaValValGlyMetGlnLeuPheGlyLysSerTyrLysGluCysValCysLysIleAsnAspAspCysThrLeuProArgTrpHisMetAsnAspPhePheHisSerPheLeuIleValPheArgValLeuCysGlyGluTrpIleGluThrMetTrpAspCysMetGluValAlaGlyGlnAlaMetCysLeuIleValTyrMetMetValMetValIleGlyAsnLeuValValLeuAsnLeuPheLeuAlaLeuLeuLeuSerSerPheSerSerAspAsnLeuThrAlaIleGluGluAspProAspAlaAsnAsnLeuGlnIleAlaValThrArgIleLysLysGlyIleAsnTyrValLysGlnThrLeuArgGluPheIleLeuLysAlaPheSerLysLysProLysIleSerArgGluIleArgGlnAlaGluAspLeuAsnThrLysLysGluAsnTyrIleSerAsnHisThrLeuAlaGluMetSerLysGlyHisAsnPheLeuLysGluLysAspLysIleSerGlyPheGlySerSerValAspLysHisLeuMetGluAspSerAspGlyGlnSerPheIleHisAsnProSerLeuThrValThrValProIleAlaProGlyGluSerAspLeuGluAsnMetAsnAlaGluGluLeuSerSerAspSerAspSerGluTyrSerLysValArgLeuAsnArgSerSerSerSerGluCysSerThrValAspAsnProLeuProGlyGluGlyGluGluAlaGluAlaGluProMetAsnSerAspGluProGluAlaCysPheThrAspGlyCysValTrpArgPheSerCysCysGlnValAsnIleGluSerGlyLysGlyLysIleTrpTrpAsnIleArgLysThrCysTyrLysIleValGluHisSerTrpPheGluSerPheIleValLeuMetIleLeuLeuSerSerGlyAlaLeuAlaPheGluAspIleTyrIleGluArgLysLysThrIleLysIleIleLeuGluTyrAlaAspLysIlePheThrTyrIlePheIleLeuGluMetLeuLeuLysTrpIleAlaTyrGlyTyrLysThrTyrPheThrAsnAlaTrpCysTrpLeuAspPheLeuIleValAspValSerLeuValThrLeuValAlaAsnThrLeuGlyTyrSerAspLeuGlyProIleLysSerLeuArgThrLeuArgAlaLeuArgProLeuArgAlaLeuSerArgPheGluGlyMetArgValValValAsnAlaLeuIleGlyAlaIleProSerIleMetAsnValLeuLeuValCysLeuIlePheTrpLeuIlePheSerIleMetGlyValAsnLeuPheAlaGlyLysPheTyrGluCysIleAsnThrThrAspGlySerArgPheProAlaSerGlnValProAsnArgSerGluCysPheAlaLeuMetAsnValSerGlnAsnValArgTrpLysAsnLeuLysValAsnPheAspAsnValGlyLeuGlyTyrLeuSerLeuLeuGlnValAlaThrPheLysGlyTrpThrIleIleMetTyrAlaAlaValAspSerValAsnValAspLysGlnProLysTyrGluTyrSerLeuTyrMetTyrIleTyrPheValValPheIleIlePheGlySerPhePheThrLeuAsnLeuPheIleGlyValIleIleAspAsnPheAsnGlnGlnLysLysLysLeuGlyGlyGlnAspIlePheMetThrGluGluGlnLysLysTyrTyrAsnAlaMetLysLysLeuGlySerLysLysProGlnLysProIleProArgProGlyValCysPheTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS542215"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1485,
          "referenceAllele": "C",
          "start": 1484
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_017004668.1:c.1255C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016860157.1:p.Arg419Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS560118"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1043,
          "referenceAllele": "C",
          "start": 1042
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XM_017004669.1:c.898C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016860158.1:p.Arg300Ter"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS560119"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1956,
          "referenceAllele": "C",
          "start": 1955
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010597",
      "geneNCBI_id": 6335,
      "geneSymbol": "SCN9A",
      "hgvs": [
        "XR_001738886.1:n.1956C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS589322"
    }
  ],
  "type": "nucleotide"
}