{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA1515333881",
  "communityStandardTitle": [
    "NM_005429.5(VEGFC):c.1146-1457A="
  ],
  "externalRecords": {
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/17697305",
        "rs": 17697305
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "4",
      "coordinates": [
        {
          "allele": "T",
          "end": 176685497,
          "referenceAllele": "T",
          "start": 176685496
        }
      ],
      "hgvs": [
        "NC_000004.12:g.176685497T=",
        "CM000666.2:g.176685497T="
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000052"
    },
    {
      "chromosome": "4",
      "coordinates": [
        {
          "allele": "T",
          "end": 177606651,
          "referenceAllele": "T",
          "start": 177606650
        }
      ],
      "hgvs": [
        "NC_000004.11:g.177606651T=",
        "CM000666.1:g.177606651T="
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000028"
    },
    {
      "chromosome": "4",
      "coordinates": [
        {
          "allele": "T",
          "end": 177843645,
          "referenceAllele": "T",
          "start": 177843644
        }
      ],
      "hgvs": [
        "NC_000004.10:g.177843645T="
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000004"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 112249,
          "referenceAllele": "A",
          "start": 112248
        }
      ],
      "hgvs": [
        "NG_034216.1:g.112249A="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS005809"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1756,
          "endIntronDirection": "-",
          "endIntronOffset": 1456,
          "referenceAllele": "A",
          "start": 1756,
          "startIntronDirection": "-",
          "startIntronOffset": 1457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012682",
      "geneNCBI_id": 7424,
      "geneSymbol": "VEGFC",
      "hgvs": [
        "ENST00000618562.2:c.1146-1457A="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000480043.1:n.1146-1457A="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS762186",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000618562.2:c.1146-1457A="
          },
          "RefSeq": {
            "hgvs": "NM_005429.5:c.1146-1457A="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000480043.1:n.1146-1457A="
          },
          "RefSeq": {
            "hgvs": "NP_005420.1:n.1146-1457A="
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1561,
          "endIntronDirection": "-",
          "endIntronOffset": 1456,
          "referenceAllele": "A",
          "start": 1561,
          "startIntronDirection": "-",
          "startIntronOffset": 1457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012682",
      "geneNCBI_id": 7424,
      "geneSymbol": "VEGFC",
      "hgvs": [
        "ENST00000618562.1:c.1146-1457A="
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000480043.1:n.1146-1457A="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS403990"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1579,
          "endIntronDirection": "-",
          "endIntronOffset": 1456,
          "referenceAllele": "A",
          "start": 1579,
          "startIntronDirection": "-",
          "startIntronOffset": 1457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012682",
      "geneNCBI_id": 7424,
      "geneSymbol": "VEGFC",
      "hgvs": [
        "NM_005429.4:c.1146-1457A="
      ],
      "proteinEffect": {
        "hgvs": "NP_005420.1:n.1146-1457A="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS030525"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 260,
          "endIntronDirection": "+",
          "endIntronOffset": 5747,
          "referenceAllele": "T",
          "start": 260,
          "startIntronDirection": "+",
          "startIntronOffset": 5746
        }
      ],
      "gene": "http://reg.genome.network/gene/GN056694",
      "geneNCBI_id": 105377555,
      "geneSymbol": "HAFML",
      "hgvs": [
        "XR_939498.1:n.260+5747T="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS134195"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 209,
          "endIntronDirection": "+",
          "endIntronOffset": 15788,
          "referenceAllele": "T",
          "start": 209,
          "startIntronDirection": "+",
          "startIntronOffset": 15787
        }
      ],
      "gene": "http://reg.genome.network/gene/GN056694",
      "geneNCBI_id": 105377555,
      "geneSymbol": "HAFML",
      "hgvs": [
        "XR_939499.1:n.209+15788T="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS134196"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 347,
          "endIntronDirection": "+",
          "endIntronOffset": 5747,
          "referenceAllele": "T",
          "start": 347,
          "startIntronDirection": "+",
          "startIntronOffset": 5746
        }
      ],
      "gene": "http://reg.genome.network/gene/GN056694",
      "geneNCBI_id": 105377555,
      "geneSymbol": "HAFML",
      "hgvs": [
        "XR_939498.2:n.347+5747T="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS612291"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 292,
          "endIntronDirection": "+",
          "endIntronOffset": 15788,
          "referenceAllele": "T",
          "start": 292,
          "startIntronDirection": "+",
          "startIntronOffset": 15787
        }
      ],
      "gene": "http://reg.genome.network/gene/GN056694",
      "geneNCBI_id": 105377555,
      "geneSymbol": "HAFML",
      "hgvs": [
        "XR_939499.2:n.292+15788T="
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS612292"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1756,
          "endIntronDirection": "-",
          "endIntronOffset": 1456,
          "referenceAllele": "A",
          "start": 1756,
          "startIntronDirection": "-",
          "startIntronOffset": 1457
        }
      ],
      "gene": "http://reg.genome.network/gene/GN012682",
      "geneNCBI_id": 7424,
      "geneSymbol": "VEGFC",
      "hgvs": [
        "NM_005429.5:c.1146-1457A="
      ],
      "proteinEffect": {
        "hgvs": "NP_005420.1:n.1146-1457A="
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS666962",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000618562.2:c.1146-1457A="
          },
          "RefSeq": {
            "hgvs": "NM_005429.5:c.1146-1457A="
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000480043.1:n.1146-1457A="
          },
          "RefSeq": {
            "hgvs": "NP_005420.1:n.1146-1457A="
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}