{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA145294",
  "communityStandardTitle": [
    "NM_003114.5(SPAG1):c.2014C>T (p.Gln672Ter)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=94263[alleleid]",
        "alleleId": 94263,
        "preferredName": "NM_003114.5(SPAG1):c.2014C>T (p.Gln672Ter)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/88683",
        "RCV": [
          "RCV000074366",
          "RCV000190929",
          "RCV000556639",
          "RCV001255310",
          "RCV002293416"
        ],
        "variationId": 88683
      }
    ],
    "ExAC": [
      {
        "@id": "http://exac.broadinstitute.org/variant/8-101245664-C-T",
        "id": "8-101245664-C-T",
        "variant": "8:101245664 C / T"
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr8:g.101245664C>T?assembly=hg19",
        "id": "chr8:g.101245664C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr8:g.100233436C>T?assembly=hg38",
        "id": "chr8:g.100233436C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/201740530",
        "rs": 201740530
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/8-101245664-C-T?dataset=gnomad_r2_1",
        "id": "8-101245664-C-T",
        "variant": "8:101245664 C / T"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/8-100233436-C-T?dataset=gnomad_r3",
        "id": "8-100233436-C-T",
        "variant": "8:100233436 C / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/8-100233436-C-T?dataset=gnomad_r4",
        "id": "8-100233436-C-T",
        "variant": "8:100233436 C / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "8",
      "coordinates": [
        {
          "allele": "T",
          "end": 100233436,
          "referenceAllele": "C",
          "start": 100233435
        }
      ],
      "hgvs": [
        "NC_000008.11:g.100233436C>T",
        "CM000670.2:g.100233436C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000056"
    },
    {
      "chromosome": "8",
      "coordinates": [
        {
          "allele": "T",
          "end": 101245664,
          "referenceAllele": "C",
          "start": 101245663
        }
      ],
      "hgvs": [
        "NC_000008.10:g.101245664C>T",
        "CM000670.1:g.101245664C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000032"
    },
    {
      "chromosome": "8",
      "coordinates": [
        {
          "allele": "T",
          "end": 101314840,
          "referenceAllele": "C",
          "start": 101314839
        }
      ],
      "hgvs": [
        "NC_000008.9:g.101314840C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000008"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 80402,
          "referenceAllele": "C",
          "start": 80401
        }
      ],
      "hgvs": [
        "NG_033834.1:g.80402C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS005532"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 80402,
          "referenceAllele": "C",
          "start": 80401
        }
      ],
      "hgvs": [
        "NG_033834.2:g.80402C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS673891"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2046,
          "referenceAllele": "C",
          "start": 2045
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "ENST00000388798.7:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000373450.3:p.Gln672Ter",
        "hgvsWellDefined": "ENSP00000373450.3:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS752752",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000388798.7:c.2014C>T"
          },
          "RefSeq": {
            "hgvs": "NM_003114.5:c.2014C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000373450.3:p.Gln672Ter"
          },
          "RefSeq": {
            "hgvs": "NP_003105.2:p.Gln672Ter"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2100,
          "referenceAllele": "C",
          "start": 2099
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "ENST00000251809.4:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000251809.3:p.Gln672Ter",
        "hgvsWellDefined": "ENSP00000251809.3:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS249765"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2205,
          "referenceAllele": "C",
          "start": 2204
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "ENST00000388798.6:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000373450.2:p.Gln672Ter",
        "hgvsWellDefined": "ENSP00000373450.2:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS274079"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 266,
          "referenceAllele": "C",
          "start": 265
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "ENST00000519424.1:n.266C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS346670"
    },
    {
      "@id": "http://reg.genome.network/allele/PA145295",
      "coordinates": [
        {
          "allele": "T",
          "end": 2298,
          "referenceAllele": "C",
          "start": 2297
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "NM_003114.4:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_003105.2:p.Gln672Ter",
        "hgvsWellDefined": "NP_003105.2:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS028386"
    },
    {
      "@id": "http://reg.genome.network/allele/PA145296",
      "coordinates": [
        {
          "allele": "T",
          "end": 2100,
          "referenceAllele": "C",
          "start": 2099
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "NM_172218.2:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_757367.1:p.Gln672Ter",
        "hgvsWellDefined": "NP_757367.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS042695"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1947,
          "referenceAllele": "C",
          "start": 1946
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517240.1:c.1861C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515542.1:p.Gln621Ter",
        "hgvsWellDefined": "XP_011515542.1:p.Gln621_Leu875delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS084439"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2100,
          "referenceAllele": "C",
          "start": 2099
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517241.1:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515543.1:p.Gln672Ter",
        "hgvsWellDefined": "XP_011515543.1:p.Gln672_Leu871delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS084440"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2142,
          "referenceAllele": "C",
          "start": 2141
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517242.1:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515544.1:p.Gln672Ter",
        "hgvsWellDefined": "XP_011515544.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS084441"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2419,
          "referenceAllele": "C",
          "start": 2418
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517243.1:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515545.1:p.Gln672Ter",
        "hgvsWellDefined": "XP_011515545.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS084442"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2074,
          "endIntronDirection": "+",
          "endIntronOffset": 2148,
          "referenceAllele": "C",
          "start": 2074,
          "startIntronDirection": "+",
          "startIntronOffset": 2147
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517244.1:c.1988+2148C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515546.1:n.1988+2148C>T"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS084443"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1947,
          "referenceAllele": "C",
          "start": 1946
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517240.2:c.1861C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515542.1:p.Gln621Ter",
        "hgvsWellDefined": "XP_011515542.1:p.Gln621_Leu875delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS544467"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2100,
          "referenceAllele": "C",
          "start": 2099
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517241.2:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515543.1:p.Gln672Ter",
        "hgvsWellDefined": "XP_011515543.1:p.Gln672_Leu871delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS544468"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2142,
          "referenceAllele": "C",
          "start": 2141
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517242.2:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515544.1:p.Gln672Ter",
        "hgvsWellDefined": "XP_011515544.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS544469"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2036,
          "referenceAllele": "C",
          "start": 2035
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_011517243.2:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_011515545.1:p.Gln672Ter",
        "hgvsWellDefined": "XP_011515545.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS544470"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2134,
          "referenceAllele": "C",
          "start": 2133
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_017013754.1:c.2119C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016869243.1:p.Gln707Ter",
        "hgvsWellDefined": "XP_016869243.1:p.Gln707_Leu961delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS566932"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2087,
          "referenceAllele": "C",
          "start": 2086
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XM_017013755.1:c.1678C>T"
      ],
      "proteinEffect": {
        "hgvs": "XP_016869244.1:p.Gln560Ter",
        "hgvsWellDefined": "XP_016869244.1:p.Gln560_Leu814delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS566933"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2074,
          "endIntronDirection": "+",
          "endIntronOffset": 2148,
          "referenceAllele": "C",
          "start": 2074,
          "startIntronDirection": "+",
          "startIntronOffset": 2147
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XR_001745580.1:n.2074+2148C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS594071"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 1907,
          "endIntronDirection": "+",
          "endIntronOffset": 2148,
          "referenceAllele": "C",
          "start": 1907,
          "startIntronDirection": "+",
          "startIntronOffset": 2147
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XR_001745581.1:n.1907+2148C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS594072"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 2000,
          "referenceAllele": "C",
          "start": 1999
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "XR_001745582.1:n.2000C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS594073"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828503018",
      "coordinates": [
        {
          "allele": "T",
          "end": 2107,
          "referenceAllele": "C",
          "start": 2106
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "NM_001374321.1:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001361250.1:p.Gln672Ter",
        "hgvsWellDefined": "NP_001361250.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS693228"
    },
    {
      "@id": "http://reg.genome.network/allele/PA145295",
      "coordinates": [
        {
          "allele": "T",
          "end": 2046,
          "referenceAllele": "C",
          "start": 2045
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "NM_003114.5:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_003105.2:p.Gln672Ter",
        "hgvsWellDefined": "NP_003105.2:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS695733",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000388798.7:c.2014C>T"
          },
          "RefSeq": {
            "hgvs": "NM_003114.5:c.2014C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000373450.3:p.Gln672Ter"
          },
          "RefSeq": {
            "hgvs": "NP_003105.2:p.Gln672Ter"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA145296",
      "coordinates": [
        {
          "allele": "T",
          "end": 2097,
          "referenceAllele": "C",
          "start": 2096
        }
      ],
      "gene": "http://reg.genome.network/gene/GN011212",
      "geneNCBI_id": 6674,
      "geneSymbol": "SPAG1",
      "hgvs": [
        "NM_172218.3:c.2014C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_757367.1:p.Gln672Ter",
        "hgvsWellDefined": "NP_757367.1:p.Gln672_Leu926delinsPheGluGluAlaLysGlnAspCysAspGlnAlaLeuGlnLeuAlaAspGlyAsnValLysAlaPheTyrArgArgAlaLeuAlaHisLysGlyLeuLysAsnTyrGlnLysSerLeuIleAspLeuAsnLysValIleLeuLeuAspProSerIleIleGluAlaLysMetGluLeuGluGluValThrArgLeuLeuAsnLeuLysAspLysThrAlaProPheAsnLysGluLysGluArgArgLysIleGluIleGlnGluValAsnGluGlyLysGluGluProGlyArgProAlaGlyGluValSerMetGlyCysLeuAlaSerGluLysGlyGlyLysSerSerArgSerProGluAspProGluLysLeuProIleAlaLysProAsnAsnAlaTyrGluPheGlyGlnIleIleAsnAlaLeuSerThrArgLysAspLysGluAlaCysAlaHisLeuLeuAlaIleThrAlaProLysAspLeuProMetPheLeuSerAsnLysLeuGluGlyAspThrPheLeuLeuLeuIleGlnSerLeuLysAsnAsnLeuIleGluLysAspProSerLeuValTyrGlnHisLeuLeuTyrLeuSerLysAlaGluArgPheLysMetMetLeuThrLeuIleSerLysGlyGlnLysGluLeuIleGluGlnLeuPheGluAspLeuSerAspThrProAsnAsnHisPheThrLeuGluAspIleGlnAlaLeuLysArgGlnTyrGluLeuTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS700505"
    }
  ],
  "type": "nucleotide"
}