{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA143993",
  "communityStandardTitle": [
    "NM_001142730.3(KCTD1):c.1916C>A (p.Pro639His)"
  ],
  "externalRecords": {
    "ClinVarAlleles": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/?term=70532[alleleid]",
        "alleleId": 70532,
        "preferredName": "NM_001142730.3(KCTD1):c.1916C>A (p.Pro639His)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/55884",
        "RCV": [
          "RCV000049295"
        ],
        "variationId": 55884
      }
    ],
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr18:g.24081108G>T?assembly=hg19",
        "id": "chr18:g.24081108G>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr18:g.26501144G>T?assembly=hg38",
        "id": "chr18:g.26501144G>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/587776999",
        "rs": 587776999
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "18",
      "coordinates": [
        {
          "allele": "T",
          "end": 26501144,
          "referenceAllele": "G",
          "start": 26501143
        }
      ],
      "hgvs": [
        "NC_000018.10:g.26501144G>T",
        "CM000680.2:g.26501144G>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000066"
    },
    {
      "chromosome": "18",
      "coordinates": [
        {
          "allele": "T",
          "end": 24081108,
          "referenceAllele": "G",
          "start": 24081107
        }
      ],
      "hgvs": [
        "NC_000018.9:g.24081108G>T",
        "CM000680.1:g.24081108G>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000042"
    },
    {
      "chromosome": "18",
      "coordinates": [
        {
          "allele": "T",
          "end": 22335106,
          "referenceAllele": "G",
          "start": 22335105
        }
      ],
      "hgvs": [
        "NC_000018.8:g.22335106G>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000018"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 161369,
          "referenceAllele": "C",
          "start": 161368
        }
      ],
      "hgvs": [
        "NG_054919.1:g.161369C>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS617556"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 1933,
          "referenceAllele": "C",
          "start": 1932
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000580059.7:c.1916C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000463041.2:p.Pro639His",
        "hgvsWellDefined": "ENSP00000463041.2:p.Pro639His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS760871",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000580059.7:c.1916C>A"
          },
          "RefSeq": {
            "hgvs": "NM_001142730.3:c.1916C>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000463041.2:p.Pro639His"
          },
          "RefSeq": {
            "hgvs": "NP_001136202.1:p.Pro639His"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 203,
          "referenceAllele": "C",
          "start": 202
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000317932.11:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000314831.7:p.Pro31His",
        "hgvsWellDefined": "ENSP00000314831.7:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS257449"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 652,
          "referenceAllele": "C",
          "start": 651
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000408011.7:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000384367.3:p.Pro31His",
        "hgvsWellDefined": "ENSP00000384367.3:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS281080"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 193,
          "referenceAllele": "C",
          "start": 192
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000417602.5:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000408405.2:p.Pro31His",
        "hgvsWellDefined": "ENSP00000408405.2:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS285002"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 379,
          "referenceAllele": "C",
          "start": 378
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000578973.1:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000463608.1:p.Pro31His",
        "hgvsWellDefined": "ENSP00000463608.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS385617"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 232,
          "referenceAllele": "C",
          "start": 231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000579973.5:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000464170.1:p.Pro31His",
        "hgvsWellDefined": "ENSP00000464170.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS386092"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 498,
          "referenceAllele": "C",
          "start": 497
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000580059.5:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000463041.1:p.Pro31His",
        "hgvsWellDefined": "ENSP00000463041.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS386141"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 149,
          "referenceAllele": "C",
          "start": 148
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000580191.5:c.116C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000464261.1:p.Pro39His",
        "hgvsWellDefined": "ENSP00000464261.1:p.Pro39His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS386216"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 198,
          "referenceAllele": "C",
          "start": 197
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "ENST00000580638.5:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000462470.1:p.Pro31His",
        "hgvsWellDefined": "ENSP00000462470.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS386416"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2825825027",
      "coordinates": [
        {
          "allele": "A",
          "end": 652,
          "referenceAllele": "C",
          "start": 651
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001136205.2:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001129677.1:p.Pro31His",
        "hgvsWellDefined": "NP_001129677.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS012648"
    },
    {
      "@id": "http://reg.genome.network/allele/PA915979880",
      "coordinates": [
        {
          "allele": "A",
          "end": 1916,
          "referenceAllele": "C",
          "start": 1915
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001142730.2:c.1916C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001136202.1:p.Pro639His",
        "hgvsWellDefined": "NP_001136202.1:p.Pro639His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS013047"
    },
    {
      "@id": "http://reg.genome.network/allele/PA143994",
      "coordinates": [
        {
          "allele": "A",
          "end": 193,
          "referenceAllele": "C",
          "start": 192
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001258221.1:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001245150.1:p.Pro31His",
        "hgvsWellDefined": "NP_001245150.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS019722"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2826456166",
      "coordinates": [
        {
          "allele": "A",
          "end": 149,
          "referenceAllele": "C",
          "start": 148
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001258222.1:c.116C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001245151.1:p.Pro39His",
        "hgvsWellDefined": "NP_001245151.1:p.Pro39His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS019723"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830462107",
      "coordinates": [
        {
          "allele": "A",
          "end": 232,
          "referenceAllele": "C",
          "start": 231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_198991.3:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_945342.1:p.Pro31His",
        "hgvsWellDefined": "NP_945342.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS044800"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2826456166",
      "coordinates": [
        {
          "allele": "A",
          "end": 260,
          "referenceAllele": "C",
          "start": 259
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001258222.2:c.116C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001245151.1:p.Pro39His",
        "hgvsWellDefined": "NP_001245151.1:p.Pro39His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS511991"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2827609718",
      "coordinates": [
        {
          "allele": "A",
          "end": 299,
          "referenceAllele": "C",
          "start": 298
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001351443.1:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001338372.1:p.Pro31His",
        "hgvsWellDefined": "NP_001338372.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS520214"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2264,
          "referenceAllele": "C",
          "start": 2263
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "XR_002958168.1:n.2264C>A"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS604294"
    },
    {
      "@id": "http://reg.genome.network/allele/PA915979880",
      "coordinates": [
        {
          "allele": "A",
          "end": 1933,
          "referenceAllele": "C",
          "start": 1932
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001142730.3:c.1916C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001136202.1:p.Pro639His",
        "hgvsWellDefined": "NP_001136202.1:p.Pro639His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS677612",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000580059.7:c.1916C>A"
          },
          "RefSeq": {
            "hgvs": "NM_001142730.3:c.1916C>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000463041.2:p.Pro639His"
          },
          "RefSeq": {
            "hgvs": "NP_001136202.1:p.Pro639His"
          }
        }
      }
    },
    {
      "@id": "http://reg.genome.network/allele/PA2826456166",
      "coordinates": [
        {
          "allele": "A",
          "end": 221,
          "referenceAllele": "C",
          "start": 220
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001258222.3:c.116C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001245151.1:p.Pro39His",
        "hgvsWellDefined": "NP_001245151.1:p.Pro39His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS680779"
    },
    {
      "@id": "http://reg.genome.network/allele/PA143994",
      "coordinates": [
        {
          "allele": "A",
          "end": 198,
          "referenceAllele": "C",
          "start": 197
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_001258221.2:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_001245150.1:p.Pro31His",
        "hgvsWellDefined": "NP_001245150.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS714918"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830462107",
      "coordinates": [
        {
          "allele": "A",
          "end": 232,
          "referenceAllele": "C",
          "start": 231
        }
      ],
      "gene": "http://reg.genome.network/gene/GN018249",
      "geneNCBI_id": 284252,
      "geneSymbol": "KCTD1",
      "hgvs": [
        "NM_198991.4:c.92C>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_945342.1:p.Pro31His",
        "hgvsWellDefined": "NP_945342.1:p.Pro31His"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS729950"
    }
  ],
  "type": "nucleotide"
}