{
  "@context": "http://reg.genome.network/schema/allele.jsonld",
  "@id": "http://reg.genome.network/allele/CA12445193",
  "communityStandardTitle": [
    "NM_000863.3(HTR1B):c.*824G>A"
  ],
  "externalRecords": {
    "MyVariantInfo_hg19": [
      {
        "@id": "http://myvariant.info/v1/variant/chr6:g.78171124C>T?assembly=hg19",
        "id": "chr6:g.78171124C>T"
      }
    ],
    "MyVariantInfo_hg38": [
      {
        "@id": "http://myvariant.info/v1/variant/chr6:g.77461407C>T?assembly=hg38",
        "id": "chr6:g.77461407C>T"
      }
    ],
    "dbSNP": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/snp/13212041",
        "rs": 13212041
      }
    ],
    "gnomAD_2": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/6-78171124-C-T?dataset=gnomad_r2_1",
        "id": "6-78171124-C-T",
        "variant": "6:78171124 C / T"
      }
    ],
    "gnomAD_3": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/6-77461407-C-T?dataset=gnomad_r3",
        "id": "6-77461407-C-T",
        "variant": "6:77461407 C / T"
      }
    ],
    "gnomAD_4": [
      {
        "@id": "http://gnomad.broadinstitute.org/variant/6-77461407-C-T?dataset=gnomad_r4",
        "id": "6-77461407-C-T",
        "variant": "6:77461407 C / T"
      }
    ]
  },
  "genomicAlleles": [
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "T",
          "end": 77461407,
          "referenceAllele": "C",
          "start": 77461406
        }
      ],
      "hgvs": [
        "NC_000006.12:g.77461407C>T",
        "CM000668.2:g.77461407C>T"
      ],
      "referenceGenome": "GRCh38",
      "referenceSequence": "http://reg.genome.network/refseq/RS000054"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "T",
          "end": 78171124,
          "referenceAllele": "C",
          "start": 78171123
        }
      ],
      "hgvs": [
        "NC_000006.11:g.78171124C>T",
        "CM000668.1:g.78171124C>T"
      ],
      "referenceGenome": "GRCh37",
      "referenceSequence": "http://reg.genome.network/refseq/RS000030"
    },
    {
      "chromosome": "6",
      "coordinates": [
        {
          "allele": "T",
          "end": 78227843,
          "referenceAllele": "C",
          "start": 78227842
        }
      ],
      "hgvs": [
        "NC_000006.10:g.78227843C>T"
      ],
      "referenceGenome": "NCBI36",
      "referenceSequence": "http://reg.genome.network/refseq/RS000006"
    }
  ],
  "transcriptAlleles": [
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2085,
          "referenceAllele": "G",
          "start": 2084
        }
      ],
      "gene": "http://reg.genome.network/gene/GN005287",
      "geneNCBI_id": 3351,
      "geneSymbol": "HTR1B",
      "hgvs": [
        "ENST00000369947.5:c.*824G>A"
      ],
      "proteinEffect": {
        "hgvs": "ENSP00000358963.3:n.*824G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS750508",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000369947.5:c.*824G>A"
          },
          "RefSeq": {
            "hgvs": "NM_000863.3:c.*824G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000358963.3:n.*824G>A"
          },
          "RefSeq": {
            "hgvs": "NP_000854.1:n.*824G>A"
          }
        }
      }
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2616,
          "referenceAllele": "G",
          "start": 2615
        }
      ],
      "gene": "http://reg.genome.network/gene/GN005287",
      "geneNCBI_id": 3351,
      "geneSymbol": "HTR1B",
      "hgvs": [
        "NM_000863.2:c.*824G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000854.1:n.*824G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS006891"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 544,
          "endIntronDirection": "-",
          "endIntronOffset": 13118,
          "referenceAllele": "C",
          "start": 544,
          "startIntronDirection": "-",
          "startIntronOffset": 13119
        }
      ],
      "hgvs": [
        "XR_942706.1:n.545-13119C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS136858"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 544,
          "endIntronDirection": "-",
          "endIntronOffset": 13118,
          "referenceAllele": "C",
          "start": 544,
          "startIntronDirection": "-",
          "startIntronOffset": 13119
        }
      ],
      "hgvs": [
        "XR_942707.1:n.545-13119C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS136859"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 544,
          "endIntronDirection": "-",
          "endIntronOffset": 13118,
          "referenceAllele": "C",
          "start": 544,
          "startIntronDirection": "-",
          "startIntronOffset": 13119
        }
      ],
      "hgvs": [
        "XR_942708.1:n.545-13119C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS136860"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 544,
          "endIntronDirection": "-",
          "endIntronOffset": 13118,
          "referenceAllele": "C",
          "start": 544,
          "startIntronDirection": "-",
          "startIntronOffset": 13119
        }
      ],
      "hgvs": [
        "XR_942709.1:n.545-13119C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS136861"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 544,
          "endIntronDirection": "-",
          "endIntronOffset": 13118,
          "referenceAllele": "C",
          "start": 544,
          "startIntronDirection": "-",
          "startIntronOffset": 13119
        }
      ],
      "hgvs": [
        "XR_942708.2:n.545-13119C>T"
      ],
      "referenceSequence": "http://reg.genome.network/refseq/RS613216"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2085,
          "referenceAllele": "G",
          "start": 2084
        }
      ],
      "gene": "http://reg.genome.network/gene/GN005287",
      "geneNCBI_id": 3351,
      "geneSymbol": "HTR1B",
      "hgvs": [
        "NM_000863.3:c.*824G>A"
      ],
      "proteinEffect": {
        "hgvs": "NP_000854.1:n.*824G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS674972",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000369947.5:c.*824G>A"
          },
          "RefSeq": {
            "hgvs": "NM_000863.3:c.*824G>A"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000358963.3:n.*824G>A"
          },
          "RefSeq": {
            "hgvs": "NP_000854.1:n.*824G>A"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}