{
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  "@id": "http://reg.genome.network/allele/CA10067799",
  "communityStandardTitle": [
    "NM_001379500.1(COL18A1):c.3241C>T (p.Arg1081Ter)"
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  "externalRecords": {
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        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4137283",
        "active": true,
        "id": "COSM4137283"
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      {
        "@id": "http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=4137284",
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        "preferredName": "NM_001379500.1(COL18A1):c.3241C>T (p.Arg1081Ter)"
      }
    ],
    "ClinVarVariations": [
      {
        "@id": "http://www.ncbi.nlm.nih.gov/clinvar/variation/666965",
        "RCV": [
          "RCV000825517",
          "RCV001869266"
        ],
        "variationId": 666965
      }
    ],
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      {
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      }
    ],
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        "@id": "http://myvariant.info/v1/variant/chr21:g.46927499C>T?assembly=hg19",
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        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
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      "referenceSequence": "http://reg.genome.network/refseq/RS263444"
    },
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        "hgvsWellDefined": "ENSP00000352798.4:p.Arg1496_Lys1754delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
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      "referenceSequence": "http://reg.genome.network/refseq/RS264897"
    },
    {
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        "hgvsWellDefined": "ENSP00000383191.2:p.Arg1081_Lys1339delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS278999"
    },
    {
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      "referenceSequence": "http://reg.genome.network/refseq/RS315017"
    },
    {
      "coordinates": [
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      ],
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        "hgvsWellDefined": "NP_085059.2:p.Arg1258_Lys1516delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
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        "hgvsWellDefined": "NP_569711.2:p.Arg1493_Lys1751delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040368"
    },
    {
      "coordinates": [
        {
          "allele": "T",
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      "hgvs": [
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      "proteinEffect": {
        "hgvs": "NP_569712.2:p.Arg1078Ter",
        "hgvsWellDefined": "NP_569712.2:p.Arg1078_Lys1336delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS040369"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2104,
          "endIntronDirection": "-",
          "endIntronOffset": 4615,
          "referenceAllele": "G",
          "start": 2104,
          "startIntronDirection": "-",
          "startIntronOffset": 4616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010937",
      "geneNCBI_id": 6573,
      "geneSymbol": "SLC19A1",
      "hgvs": [
        "XM_011529707.1:c.1585-4616G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_011528009.1:n.1585-4616G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS096773"
    },
    {
      "coordinates": [
        {
          "allele": "A",
          "end": 2285,
          "endIntronDirection": "-",
          "endIntronOffset": 4615,
          "referenceAllele": "G",
          "start": 2285,
          "startIntronDirection": "-",
          "startIntronOffset": 4616
        }
      ],
      "gene": "http://reg.genome.network/gene/GN010937",
      "geneNCBI_id": 6573,
      "geneSymbol": "SLC19A1",
      "hgvs": [
        "XM_017028445.2:c.1585-4616G>A"
      ],
      "proteinEffect": {
        "hgvs": "XP_016883934.1:n.1585-4616G>A"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS578196"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2830036287",
      "coordinates": [
        {
          "allele": "T",
          "end": 3781,
          "referenceAllele": "C",
          "start": 3780
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002195",
      "geneNCBI_id": 80781,
      "geneSymbol": "COL18A1",
      "hgvs": [
        "NM_030582.4:c.3772C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_085059.2:p.Arg1258Ter",
        "hgvsWellDefined": "NP_085059.2:p.Arg1258_Lys1516delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS670969"
    },
    {
      "@id": "http://reg.genome.network/allele/PA916058679",
      "coordinates": [
        {
          "allele": "T",
          "end": 4486,
          "referenceAllele": "C",
          "start": 4485
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002195",
      "geneNCBI_id": 80781,
      "geneSymbol": "COL18A1",
      "hgvs": [
        "NM_130444.3:c.4477C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_569711.2:p.Arg1493Ter",
        "hgvsWellDefined": "NP_569711.2:p.Arg1493_Lys1751delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS671793"
    },
    {
      "coordinates": [
        {
          "allele": "T",
          "end": 3298,
          "referenceAllele": "C",
          "start": 3297
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002195",
      "geneNCBI_id": 80781,
      "geneSymbol": "COL18A1",
      "hgvs": [
        "NM_130445.4:c.3232C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_569712.2:p.Arg1078Ter",
        "hgvsWellDefined": "NP_569712.2:p.Arg1078_Lys1336delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS671794"
    },
    {
      "@id": "http://reg.genome.network/allele/PA2828833964",
      "coordinates": [
        {
          "allele": "T",
          "end": 3307,
          "referenceAllele": "C",
          "start": 3306
        }
      ],
      "gene": "http://reg.genome.network/gene/GN002195",
      "geneNCBI_id": 80781,
      "geneSymbol": "COL18A1",
      "hgvs": [
        "NM_001379500.1:c.3241C>T"
      ],
      "proteinEffect": {
        "hgvs": "NP_001366429.1:p.Arg1081Ter",
        "hgvsWellDefined": "NP_001366429.1:p.Arg1081_Lys1339delinsGlyThrAspAsnGluValAlaAlaLeuGlnProProValValGlnLeuHisAspSerAsnProTyrProArgArgGluHisProHisProThrAlaArgProTrpArgAlaAspAspIleLeuAlaSerProProArgLeuProGluProGlnProTyrProGlyAlaProHisHisSerSerTyrValHisLeuArgProAlaArgProThrSerProProAlaHisSerHisArgAspPheGlnProValLeuHisLeuValAlaLeuAsnSerProLeuSerGlyGlyMetArgGlyIleArgGlyAlaAspPheGlnCysPheGlnGlnAlaArgAlaValGlyLeuAlaGlyThrPheArgAlaPheLeuSerSerArgLeuGlnAspLeuTyrSerIleValArgArgAlaAspArgAlaAlaValProIleValAsnLeuLysAspGluLeuLeuPheProSerTrpGluAlaLeuPheSerGlySerGluGlyProLeuLysProGlyAlaArgIlePheSerPheAspGlyLysAspValLeuArgHisProThrTrpProGlnLysSerValTrpHisGlySerAspProAsnGlyArgArgLeuThrGluSerTyrCysGluThrTrpArgThrGluAlaProSerAlaThrGlyGlnAlaSerSerLeuLeuGlyGlyArgLeuLeuGlyGlnSerAlaAlaSerCysHisHisAlaTyrIleValLeuCysIleGluAsnSerPheMetThrAlaSerLysTer"
      },
      "referenceSequence": "http://reg.genome.network/refseq/RS722006",
      "MANE": {
        "maneVersion": "1.3",
        "maneStatus": "MANE Select",
        "nucleotide": {
          "Ensembl": {
            "hgvs": "ENST00000651438.1:c.3241C>T"
          },
          "RefSeq": {
            "hgvs": "NM_001379500.1:c.3241C>T"
          }
        },
        "protein": {
          "Ensembl": {
            "hgvs": "ENSP00000498485.1:p.Arg1081Ter"
          },
          "RefSeq": {
            "hgvs": "NP_001366429.1:p.Arg1081Ter"
          }
        }
      }
    }
  ],
  "type": "nucleotide"
}