Canonical Allele Identifier: CA5121185
Gene: SPTLC1 HGNC NCBI

Linked Data

ClinVar Variation Id: 287303
dbSNP Id: rs141292904
gnomAD v2: 9-94794758-C-T
gnomAD v3: 9-92032476-C-T
gnomAD v4: 9-92032476-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000009.12:g.92032476C>T , CM000671.2:g.92032476C>T GRCh38
NC_000009.11:g.94794758C>T , CM000671.1:g.94794758C>T GRCh37
NC_000009.10:g.93834579C>T NCBI36
NG_007950.1:g.87933G>A , LRG_272:g.87933G>A

Transcript Alleles

HGVS Amino-acid change
ENST00000686600.1:c.*123G>A ENSP00000509268.1:n.*123G>A
ENST00000686799.1:n.1735G>A
ENST00000687427.1:c.*167G>A ENSP00000509426.1:n.*167G>A
ENST00000687817.1:c.*3809G>A ENSP00000508926.1:n.*3809G>A
ENST00000687972.1:c.1471G>A ENSP00000509208.1:p.Val491Ile
ENST00000689261.1:n.1318G>A
ENST00000689401.1:c.*1661G>A ENSP00000510251.1:n.*1661G>A
ENST00000690095.1:n.1799G>A
ENST00000690139.1:c.*1112G>A ENSP00000510483.1:n.*1112G>A
ENST00000692458.1:n.2049G>A
ENST00000262554.7:c.1411G>A MANE Select ENSP00000262554.2:p.Val471Ile
ENST00000642671.1:c.1629+2334G>A ENSP00000495764.1:n.1629+2334G>A
ENST00000643599.1:c.1396+2334G>A ENSP00000494770.1:n.1396+2334G>A
ENST00000644140.1:c.*1152G>A ENSP00000493933.1:n.*1152G>A
ENST00000646481.1:c.1260+2334G>A ENSP00000496627.1:n.1260+2334G>A
ENST00000646534.1:c.*1214G>A ENSP00000495388.1:n.*1214G>A
ENST00000262554.6:c.1411G>A ENSP00000262554.2:p.Val471Ile
ENST00000469778.1:n.368G>A
NM_001281303.1:c.1379G>A NP_001268232.1:p.Arg460His
NM_006415.3:c.1411G>A NP_006406.1:p.Val471Ile
XM_011518139.1:c.946G>A XP_011516441.1:p.Val316Ile
XM_011518139.3:c.946G>A XP_011516441.1:p.Val316Ile
XM_017014200.2:c.1045G>A XP_016869689.1:p.Val349Ile
XM_017014201.2:c.1045G>A XP_016869690.1:p.Val349Ile
XM_024447378.1:c.946G>A XP_024303146.1:p.Val316Ile
XM_024447379.1:c.946G>A XP_024303147.1:p.Val316Ile
XR_002956744.1:n.1561G>A
NM_006415.4:c.1411G>A MANE Select NP_006406.1:p.Val471Ile
NM_001281303.2:c.1379G>A NP_001268232.1:p.Arg460His
NM_001368272.1:c.1045G>A NP_001355201.1:p.Val349Ile
NM_001368273.1:c.946G>A NP_001355202.1:p.Val316Ile