Canonical Allele Identifier: CA46688635
Gene: MSH6 HGNC NCBI

Linked Data

ClinVar Variation Id: 480918
dbSNP Id: rs768444916
gnomAD v3: 2-47783490-C-T
gnomAD v4: 2-47783490-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47783490C>T , CM000664.2:g.47783490C>T GRCh38
NC_000002.11:g.48010629C>T , CM000664.1:g.48010629C>T GRCh37
NC_000002.10:g.47864133C>T NCBI36
NG_007111.1:g.5344C>T , LRG_219:g.5344C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000700004.2:c.257C>T ENSP00000514752.2:p.Thr86Ile
ENST00000699999.1:n.341C>T
ENST00000700000.1:c.257C>T ENSP00000514749.1:p.Thr86Ile
ENST00000700001.1:n.329C>T
ENST00000700002.1:c.257C>T ENSP00000514750.1:p.Thr86Ile
ENST00000700003.1:c.257C>T ENSP00000514751.1:p.Thr86Ile
ENST00000234420.11:c.257C>T MANE Select ENSP00000234420.5:p.Thr86Ile
ENST00000540021.6:c.237+20C>T ENSP00000446475.1:n.237+20C>T
ENST00000652107.1:c.-37-7437C>T ENSP00000498629.1:n.-37-7437C>T
ENST00000673637.1:c.-38+259C>T ENSP00000501310.1:n.-38+259C>T
ENST00000673922.1:n.346C>T
ENST00000234420.9:c.257C>T ENSP00000234420.4:p.Thr86Ile
ENST00000445503.5:c.257C>T ENSP00000405294.1:p.Thr86Ile
ENST00000456246.1:c.257C>T ENSP00000410570.1:p.Thr86Ile
ENST00000493177.1:n.321C>T
ENST00000540021.5:c.237+20C>T ENSP00000446475.1:n.237+20C>T
ENST00000606499.1:c.-37-7437C>T ENSP00000475605.1:n.-37-7437C>T
ENST00000614496.4:c.-480C>T ENSP00000477844.1:n.-480C>T
ENST00000616033.4:c.254C>T ENSP00000480261.1:p.Thr85Ile
ENST00000622629.4:c.-2840C>T ENSP00000482078.1:n.-2840C>T
NM_000179.2:c.257C>T , LRG_219t1:c.257C>T NP_000170.1:p.Thr86Ile
NM_001281492.1:c.237+20C>T NP_001268421.1:n.237+20C>T
NM_001281493.1:c.-480C>T NP_001268422.1:n.-480C>T
XM_011532800.1:c.-38+259C>T XP_011531102.1:n.-38+259C>T
XM_024452819.1:c.257C>T XP_024308587.1:p.Thr86Ile
XM_024452822.1:c.-480C>T XP_024308590.1:n.-480C>T
NM_000179.3:c.257C>T MANE Select NP_000170.1:p.Thr86Ile
NM_001281492.2:c.237+20C>T NP_001268421.1:n.237+20C>T
NM_001281493.2:c.-480C>T NP_001268422.1:n.-480C>T