Canonical Allele Identifier: CA366743913

Gene: PMS2

Linked Data

• ClinVar Variation Id: 455732
• ClinVar RCV Id: RCV000547672 ; RCV001025376 ; RCV001290677 ; RCV001775843
• dbSNP Id: rs878854055
• gnomAD v4: 7-5999161-C-T
• MyVariant Identifiers: chr7:g.6038792C>T (hg19) ; chr7:g.5999161C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5999161C>T , CM000669.2:g.5999161C>T	GRCh38
NC_000007.13:g.6038792C>T , CM000669.1:g.6038792C>T	GRCh37
NC_000007.12:g.6005318C>T	NCBI36
NG_008466.1:g.14946G>A , LRG_161:g.14946G>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000699814.2:c.*246G>A	ENSP00000514615.2:n.*246G>A
ENST00000699840.2:c.649G>A	ENSP00000514638.2:p.Gly217Ser
ENST00000699930.2:c.597+55G>A	ENSP00000514695.2:n.597+55G>A
ENST00000406569.8:c.652G>A	ENSP00000514464.1:p.Gly218Ser
ENST00000644110.2:c.*246G>A	ENSP00000496392.2:n.*246G>A
ENST00000699752.1:c.652G>A	ENSP00000514561.1:p.Gly218Ser
ENST00000699753.1:c.*51G>A	ENSP00000514562.1:n.*51G>A
ENST00000699754.1:c.652G>A	ENSP00000514563.1:p.Gly218Ser
ENST00000699755.1:c.*51G>A	ENSP00000514564.1:n.*51G>A
ENST00000699756.1:c.*239G>A	ENSP00000514565.1:n.*239G>A
ENST00000699757.1:c.101G>A	ENSP00000514566.1:p.Arg34Lys
ENST00000699758.1:c.365G>A	ENSP00000514567.1:p.Arg122Lys
ENST00000699759.1:n.724G>A
ENST00000699760.1:c.334G>A	ENSP00000514568.1:p.Gly112Ser
ENST00000699761.1:c.247G>A	ENSP00000514569.1:p.Gly83Ser
ENST00000699762.1:c.133-1738G>A	ENSP00000514570.1:n.133-1738G>A
ENST00000699763.1:c.247G>A	ENSP00000514571.1:p.Gly83Ser
ENST00000699764.1:c.652G>A	ENSP00000514572.1:p.Gly218Ser
ENST00000699765.1:c.334G>A	ENSP00000514573.1:p.Gly112Ser
ENST00000699766.1:c.652G>A	ENSP00000514574.1:p.Gly218Ser
ENST00000699767.1:c.652G>A	ENSP00000514575.1:p.Gly218Ser
ENST00000699768.1:c.652G>A	ENSP00000514576.1:p.Gly218Ser
ENST00000699811.1:c.247G>A	ENSP00000514614.1:p.Gly83Ser
ENST00000699813.1:n.765G>A
ENST00000699814.1:c.473G>A
ENST00000699815.1:c.*153G>A	ENSP00000514616.1:n.*153G>A
ENST00000699816.1:c.247G>A	ENSP00000514617.1:p.Gly83Ser
ENST00000699817.1:c.*246G>A	ENSP00000514618.1:n.*246G>A
ENST00000699818.1:c.247G>A	ENSP00000514619.1:p.Gly83Ser
ENST00000699819.1:c.185G>A	ENSP00000514620.1:p.Arg62Lys
ENST00000699820.1:c.652G>A	ENSP00000514621.1:p.Gly218Ser
ENST00000699821.1:c.247G>A	ENSP00000514622.1:p.Gly83Ser
ENST00000699822.1:c.*104G>A	ENSP00000514623.1:n.*104G>A
ENST00000699823.1:c.247G>A	ENSP00000514624.1:p.Gly83Ser
ENST00000699824.1:c.*155G>A	ENSP00000514625.1:n.*155G>A
ENST00000699825.1:c.247G>A	ENSP00000514626.1:p.Gly83Ser
ENST00000699826.1:c.*51G>A	ENSP00000514627.1:n.*51G>A
ENST00000699827.1:c.538-1738G>A	ENSP00000514628.1:n.538-1738G>A
ENST00000699828.1:c.652G>A	ENSP00000514629.1:p.Gly218Ser
ENST00000699829.1:c.*153G>A	ENSP00000514630.1:n.*153G>A
ENST00000699830.1:c.*51G>A	ENSP00000514631.1:n.*51G>A
ENST00000699831.1:n.564G>A
ENST00000699832.1:n.935G>A
ENST00000699833.1:n.732G>A
ENST00000699834.1:n.807+51G>A
ENST00000699837.1:c.247G>A	ENSP00000514635.1:p.Gly83Ser
ENST00000699838.1:c.*552G>A	ENSP00000514636.1:n.*552G>A
ENST00000699839.1:c.838G>A	ENSP00000514637.1:p.Gly280Ser
ENST00000699840.1:c.649G>A	ENSP00000514638.1:p.Gly217Ser
ENST00000699916.1:c.200G>A	ENSP00000514684.1:p.Arg67Lys
ENST00000699917.1:c.*101G>A	ENSP00000514685.1:n.*101G>A
ENST00000699918.1:c.*153G>A	ENSP00000514686.1:n.*153G>A
ENST00000699919.1:c.*239G>A	ENSP00000514687.1:n.*239G>A
ENST00000699920.1:c.*288G>A	ENSP00000514688.1:n.*288G>A
ENST00000699928.1:c.652G>A	ENSP00000514693.1:p.Gly218Ser
ENST00000699929.1:c.*51G>A	ENSP00000514694.1:n.*51G>A
ENST00000699930.1:c.597+55G>A	ENSP00000514695.1:n.597+55G>A
ENST00000699931.1:n.763G>A
ENST00000699932.1:c.652G>A	ENSP00000514696.1:p.Gly218Ser
ENST00000699933.1:n.732G>A
ENST00000699951.1:c.652G>A	ENSP00000514706.1:p.Gly218Ser
ENST00000699952.1:c.652G>A	ENSP00000514707.1:p.Gly218Ser
ENST00000699953.1:c.652G>A	ENSP00000514708.1:p.Gly218Ser
ENST00000699954.1:c.*51G>A	ENSP00000514709.1:n.*51G>A
ENST00000265849.12:c.652G>A MANE Select	ENSP00000265849.7:p.Gly218Ser
ENST00000642292.1:c.247G>A	ENSP00000495524.1:p.Gly83Ser
ENST00000642456.1:c.247G>A	ENSP00000493814.1:p.Gly83Ser
ENST00000643595.1:c.*51G>A	ENSP00000494497.1:n.*51G>A
ENST00000644110.1:c.334G>A	ENSP00000496392.1:p.Gly112Ser
ENST00000265849.11:c.652G>A	ENSP00000265849.7:p.Gly218Ser
ENST00000382321.5:c.652G>A	ENSP00000371758.4:p.Gly218Ser
ENST00000406569.7:n.652G>A
ENST00000441476.6:c.334G>A	ENSP00000392843.2:p.Gly112Ser
ENST00000469652.1:n.62+6832G>A
NM_000535.5:c.652G>A , LRG_161t1:c.652G>A	NP_000526.1:p.Gly218Ser
NR_003085.2:n.734G>A
XM_006715742.2:c.646G>A	XP_006715805.1:p.Gly216Ser
XM_011515427.1:c.697G>A	XP_011513729.1:p.Gly233Ser
XM_011515428.1:c.697G>A	XP_011513730.1:p.Gly233Ser
XM_011515429.1:c.334G>A	XP_011513731.1:p.Gly112Ser
XM_011515430.1:c.334G>A	XP_011513732.1:p.Gly112Ser
NM_000535.6:c.652G>A	NP_000526.2:p.Gly218Ser
NM_001322003.1:c.247G>A	NP_001308932.1:p.Gly83Ser
NM_001322004.1:c.247G>A	NP_001308933.1:p.Gly83Ser
NM_001322005.1:c.247G>A	NP_001308934.1:p.Gly83Ser
NM_001322006.1:c.652G>A	NP_001308935.1:p.Gly218Ser
NM_001322007.1:c.334G>A	NP_001308936.1:p.Gly112Ser
NM_001322008.1:c.334G>A	NP_001308937.1:p.Gly112Ser
NM_001322009.1:c.247G>A	NP_001308938.1:p.Gly83Ser
NM_001322010.1:c.247G>A	NP_001308939.1:p.Gly83Ser
NM_001322011.1:c.-282G>A	NP_001308940.1:n.-282G>A
NM_001322012.1:c.-282G>A	NP_001308941.1:n.-282G>A
NM_001322013.1:c.133-1738G>A	NP_001308942.1:n.133-1738G>A
NM_001322014.1:c.652G>A	NP_001308943.1:p.Gly218Ser
NM_001322015.1:c.343G>A	NP_001308944.1:p.Gly115Ser
NR_136154.1:n.739G>A
XM_017012342.2:c.-182G>A	XP_016867831.1:n.-182G>A
XM_024446800.1:c.247G>A	XP_024302568.1:p.Gly83Ser
NM_000535.7:c.652G>A MANE Select	NP_000526.2:p.Gly218Ser
NM_001322003.2:c.247G>A	NP_001308932.1:p.Gly83Ser
NM_001322004.2:c.247G>A	NP_001308933.1:p.Gly83Ser
NM_001322005.2:c.247G>A	NP_001308934.1:p.Gly83Ser
NM_001322006.2:c.652G>A	NP_001308935.1:p.Gly218Ser
NM_001322008.2:c.334G>A	NP_001308937.1:p.Gly112Ser
NM_001322009.2:c.247G>A	NP_001308938.1:p.Gly83Ser
NM_001322010.2:c.247G>A	NP_001308939.1:p.Gly83Ser
NM_001322011.2:c.-282G>A	NP_001308940.1:n.-282G>A
NM_001322012.2:c.-282G>A	NP_001308941.1:n.-282G>A
NM_001322013.2:c.133-1738G>A	NP_001308942.1:n.133-1738G>A
NM_001322014.2:c.652G>A	NP_001308943.1:p.Gly218Ser
NM_001322015.2:c.343G>A	NP_001308944.1:p.Gly115Ser
NM_001322007.2:c.334G>A	NP_001308936.1:p.Gly112Ser