Canonical Allele Identifier: CA366740144

Gene: PMS2

Linked Data

• dbSNP Id: rs754339271
• MyVariant Identifiers: chr7:g.6026667T>A (hg19) ; chr7:g.5987036T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5987036T>A , CM000669.2:g.5987036T>A	GRCh38
NC_000007.13:g.6026667T>A , CM000669.1:g.6026667T>A	GRCh37
NC_000007.12:g.5993193T>A	NCBI36
NG_008466.1:g.27071A>T , LRG_161:g.27071A>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000699814.2:c.*1125A>T	ENSP00000514615.2:n.*1125A>T
ENST00000699840.2:c.1726A>T	ENSP00000514638.2:p.Lys576Ter
ENST00000699930.2:c.1621A>T	ENSP00000514695.2:p.Lys541Ter
ENST00000406569.8:c.1678+51A>T	ENSP00000514464.1:n.1678+51A>T
ENST00000644110.2:c.*1323A>T	ENSP00000496392.2:n.*1323A>T
ENST00000699752.1:c.1573A>T	ENSP00000514561.1:p.Lys525Ter
ENST00000699753.1:c.*1150A>T	ENSP00000514562.1:n.*1150A>T
ENST00000699754.1:c.1531A>T	ENSP00000514563.1:p.Lys511Ter
ENST00000699755.1:c.*1128A>T	ENSP00000514564.1:n.*1128A>T
ENST00000699756.1:c.*1316A>T	ENSP00000514565.1:n.*1316A>T
ENST00000699757.1:c.*986A>T	ENSP00000514566.1:n.*986A>T
ENST00000699758.1:c.*986A>T	ENSP00000514567.1:n.*986A>T
ENST00000699759.1:n.2583A>T
ENST00000699760.1:c.1411A>T	ENSP00000514568.1:p.Lys471Ter
ENST00000699761.1:c.1324A>T	ENSP00000514569.1:p.Lys442Ter
ENST00000699762.1:c.1156A>T	ENSP00000514570.1:p.Lys386Ter
ENST00000699763.1:c.*819A>T	ENSP00000514571.1:n.*819A>T
ENST00000699764.1:c.*47A>T	ENSP00000514572.1:n.*47A>T
ENST00000699765.1:c.*825A>T	ENSP00000514573.1:n.*825A>T
ENST00000699766.1:c.1729A>T	ENSP00000514574.1:p.Lys577Ter
ENST00000699767.1:c.1729A>T	ENSP00000514575.1:p.Lys577Ter
ENST00000699768.1:c.1729A>T	ENSP00000514576.1:p.Lys577Ter
ENST00000699811.1:c.1324A>T	ENSP00000514614.1:p.Lys442Ter
ENST00000699813.1:n.1842A>T
ENST00000699814.1:c.1352A>T
ENST00000699815.1:c.*1260A>T	ENSP00000514616.1:n.*1260A>T
ENST00000699816.1:c.*619A>T	ENSP00000514617.1:n.*619A>T
ENST00000699817.1:c.*1323A>T	ENSP00000514618.1:n.*1323A>T
ENST00000699818.1:c.1324A>T	ENSP00000514619.1:p.Lys442Ter
ENST00000699819.1:c.*886A>T	ENSP00000514620.1:n.*886A>T
ENST00000699820.1:c.1144+2764A>T	ENSP00000514621.1:n.1144+2764A>T
ENST00000699821.1:c.1324A>T	ENSP00000514622.1:p.Lys442Ter
ENST00000699822.1:c.*1181A>T	ENSP00000514623.1:n.*1181A>T
ENST00000699823.1:c.1324A>T	ENSP00000514624.1:p.Lys442Ter
ENST00000699824.1:c.*1232A>T	ENSP00000514625.1:n.*1232A>T
ENST00000699825.1:c.1168A>T	ENSP00000514626.1:p.Lys390Ter
ENST00000699826.1:c.*1128A>T	ENSP00000514627.1:n.*1128A>T
ENST00000699827.1:c.1561A>T	ENSP00000514628.1:p.Lys521Ter
ENST00000699828.1:c.*819A>T	ENSP00000514629.1:n.*819A>T
ENST00000699833.1:n.3501A>T
ENST00000699837.1:c.1324A>T	ENSP00000514635.1:p.Lys442Ter
ENST00000699838.1:c.*1629A>T	ENSP00000514636.1:n.*1629A>T
ENST00000699839.1:c.1915A>T	ENSP00000514637.1:p.Lys639Ter
ENST00000699916.1:c.*986A>T	ENSP00000514684.1:n.*986A>T
ENST00000699917.1:c.*1178A>T	ENSP00000514685.1:n.*1178A>T
ENST00000699918.1:c.*1230A>T	ENSP00000514686.1:n.*1230A>T
ENST00000699919.1:c.*1316A>T	ENSP00000514687.1:n.*1316A>T
ENST00000699920.1:c.*1365A>T	ENSP00000514688.1:n.*1365A>T
ENST00000699928.1:c.989-4045A>T	ENSP00000514693.1:n.989-4045A>T
ENST00000699929.1:c.*1030A>T	ENSP00000514694.1:n.*1030A>T
ENST00000699930.1:c.1621A>T	ENSP00000514695.1:p.Lys541Ter
ENST00000699931.1:n.3157A>T
ENST00000699951.1:c.*825A>T	ENSP00000514706.1:n.*825A>T
ENST00000699952.1:c.803+10290A>T	ENSP00000514707.1:n.803+10290A>T
ENST00000699953.1:c.*836A>T	ENSP00000514708.1:n.*836A>T
ENST00000699954.1:c.*1030A>T	ENSP00000514709.1:n.*1030A>T
ENST00000265849.12:c.1729A>T MANE Select	ENSP00000265849.7:p.Lys577Ter
ENST00000642292.1:c.1324A>T	ENSP00000495524.1:p.Lys442Ter
ENST00000642456.1:c.1324A>T	ENSP00000493814.1:p.Lys442Ter
ENST00000643595.1:c.*1128A>T	ENSP00000494497.1:n.*1128A>T
ENST00000644110.1:c.1411A>T	ENSP00000496392.1:p.Lys471Ter
ENST00000265849.11:c.1729A>T	ENSP00000265849.7:p.Lys577Ter
ENST00000382321.5:c.804-4045A>T	ENSP00000371758.4:n.804-4045A>T
ENST00000406569.7:n.1678+51A>T
ENST00000441476.6:c.1411A>T	ENSP00000392843.2:p.Lys471Ter
ENST00000469652.1:n.63-4131A>T
NM_000535.5:c.1729A>T , LRG_161t1:c.1729A>T	NP_000526.1:p.Lys577Ter
NR_003085.2:n.1811A>T
XM_006715742.2:c.1723A>T	XP_006715805.1:p.Lys575Ter
XM_006715744.2:c.796A>T	XP_006715807.1:p.Lys266Ter
XM_011515427.1:c.1774A>T	XP_011513729.1:p.Lys592Ter
XM_011515428.1:c.1618A>T	XP_011513730.1:p.Lys540Ter
XM_011515429.1:c.1411A>T	XP_011513731.1:p.Lys471Ter
XM_011515430.1:c.1411A>T	XP_011513732.1:p.Lys471Ter
NM_000535.6:c.1729A>T	NP_000526.2:p.Lys577Ter
NM_001322003.1:c.1324A>T	NP_001308932.1:p.Lys442Ter
NM_001322004.1:c.1324A>T	NP_001308933.1:p.Lys442Ter
NM_001322005.1:c.1324A>T	NP_001308934.1:p.Lys442Ter
NM_001322006.1:c.1573A>T	NP_001308935.1:p.Lys525Ter
NM_001322007.1:c.1411A>T	NP_001308936.1:p.Lys471Ter
NM_001322008.1:c.1411A>T	NP_001308937.1:p.Lys471Ter
NM_001322009.1:c.1324A>T	NP_001308938.1:p.Lys442Ter
NM_001322010.1:c.1168A>T	NP_001308939.1:p.Lys390Ter
NM_001322011.1:c.796A>T	NP_001308940.1:p.Lys266Ter
NM_001322012.1:c.796A>T	NP_001308941.1:p.Lys266Ter
NM_001322013.1:c.1156A>T	NP_001308942.1:p.Lys386Ter
NM_001322014.1:c.1729A>T	NP_001308943.1:p.Lys577Ter
NM_001322015.1:c.1420A>T	NP_001308944.1:p.Lys474Ter
NR_136154.1:n.1816A>T
XM_006715744.4:c.796A>T	XP_006715807.1:p.Lys266Ter
XM_017012342.2:c.796A>T	XP_016867831.1:p.Lys266Ter
XM_024446800.1:c.1168A>T	XP_024302568.1:p.Lys390Ter
NM_000535.7:c.1729A>T MANE Select	NP_000526.2:p.Lys577Ter
NM_001322003.2:c.1324A>T	NP_001308932.1:p.Lys442Ter
NM_001322004.2:c.1324A>T	NP_001308933.1:p.Lys442Ter
NM_001322005.2:c.1324A>T	NP_001308934.1:p.Lys442Ter
NM_001322006.2:c.1573A>T	NP_001308935.1:p.Lys525Ter
NM_001322008.2:c.1411A>T	NP_001308937.1:p.Lys471Ter
NM_001322009.2:c.1324A>T	NP_001308938.1:p.Lys442Ter
NM_001322010.2:c.1168A>T	NP_001308939.1:p.Lys390Ter
NM_001322011.2:c.796A>T	NP_001308940.1:p.Lys266Ter
NM_001322012.2:c.796A>T	NP_001308941.1:p.Lys266Ter
NM_001322013.2:c.1156A>T	NP_001308942.1:p.Lys386Ter
NM_001322014.2:c.1729A>T	NP_001308943.1:p.Lys577Ter
NM_001322015.2:c.1420A>T	NP_001308944.1:p.Lys474Ter
NM_001322007.2:c.1411A>T	NP_001308936.1:p.Lys471Ter