Canonical Allele Identifier: CA346746071

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 819349
• ClinVar RCV Id: RCV001011829
• dbSNP Id: rs764593111
• MyVariant Identifiers: chr2:g.48026609G>C (hg19) ; chr2:g.47799470G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799470G>C , CM000664.2:g.47799470G>C	GRCh38
NC_000002.11:g.48026609G>C , CM000664.1:g.48026609G>C	GRCh37
NC_000002.10:g.47880113G>C	NCBI36
NG_007111.1:g.21324G>C , LRG_219:g.21324G>C

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.1190G>C (MSH6)	ENSP00000406248.2:p.Cys397Ser
ENST00000420813.6:c.1190G>C (MSH6)	ENSP00000390382.2:p.Cys397Ser
ENST00000455383.6:c.1190G>C (MSH6)	ENSP00000397484.2:p.Cys397Ser
ENST00000700004.2:c.1487G>C (MSH6)	ENSP00000514752.2:p.Cys496Ser
ENST00000699999.1:n.1571G>C (MSH6)
ENST00000700000.1:c.1487G>C (MSH6)	ENSP00000514749.1:p.Cys496Ser
ENST00000700002.1:c.1493G>C (MSH6)	ENSP00000514750.1:p.Cys498Ser
ENST00000700003.1:c.627+3407G>C (MSH6)	ENSP00000514751.1:n.627+3407G>C
ENST00000700004.1:c.644G>C (MSH6)	ENSP00000514752.1:p.Cys215Ser
ENST00000234420.11:c.1487G>C (MSH6) MANE Select	ENSP00000234420.5:p.Cys496Ser
ENST00000540021.6:c.1097G>C (MSH6)	ENSP00000446475.1:p.Cys366Ser
ENST00000652107.1:c.1190G>C (MSH6)	ENSP00000498629.1:p.Cys397Ser
ENST00000673637.1:c.1190G>C (MSH6)	ENSP00000501310.1:p.Cys397Ser
ENST00000234420.9:c.1487G>C (MSH6)	ENSP00000234420.4:p.Cys496Ser
ENST00000405808.5:c.169+8725C>G (FBXO11)	ENSP00000385127.1:n.169+8725C>G
ENST00000434234.5:c.*124+8524C>G (FBXO11)	ENSP00000402692.1:n.*124+8524C>G
ENST00000445503.5:c.*834G>C (MSH6)	ENSP00000405294.1:n.*834G>C
ENST00000538136.1:c.581G>C (MSH6)	ENSP00000438580.1:p.Cys194Ser
ENST00000540021.5:c.1097G>C (MSH6)	ENSP00000446475.1:p.Cys366Ser
ENST00000614496.4:c.581G>C (MSH6)	ENSP00000477844.1:p.Cys194Ser
ENST00000616033.4:c.1484G>C (MSH6)	ENSP00000480261.1:p.Cys495Ser
ENST00000622629.4:c.-1610G>C (MSH6)	ENSP00000482078.1:n.-1610G>C
NM_000179.2:c.1487G>C , LRG_219t1:c.1487G>C (MSH6)	NP_000170.1:p.Cys496Ser
NM_001281492.1:c.1097G>C (MSH6)	NP_001268421.1:p.Cys366Ser
NM_001281493.1:c.581G>C (MSH6)	NP_001268422.1:p.Cys194Ser
NM_001281494.1:c.581G>C (MSH6)	NP_001268423.1:p.Cys194Ser
XM_005264271.1:c.1190G>C (MSH6)	XP_005264328.1:p.Cys397Ser
XM_011532798.1:c.1304G>C (MSH6)	XP_011531100.1:p.Cys435Ser
XM_011532799.1:c.1190G>C (MSH6)	XP_011531101.1:p.Cys397Ser
XM_011532800.1:c.1190G>C (MSH6)	XP_011531102.1:p.Cys397Ser
XM_024452819.1:c.1487G>C (MSH6)	XP_024308587.1:p.Cys496Ser
XM_024452820.1:c.1304G>C (MSH6)	XP_024308588.1:p.Cys435Ser
XM_024452821.1:c.1190G>C (MSH6)	XP_024308589.1:p.Cys397Ser
XM_024452822.1:c.581G>C (MSH6)	XP_024308590.1:p.Cys194Ser
NM_000179.3:c.1487G>C (MSH6) MANE Select	NP_000170.1:p.Cys496Ser
NM_001281492.2:c.1097G>C (MSH6)	NP_001268421.1:p.Cys366Ser
NM_001281493.2:c.581G>C (MSH6)	NP_001268422.1:p.Cys194Ser
NM_001281494.2:c.581G>C (MSH6)	NP_001268423.1:p.Cys194Ser