Canonical Allele Identifier: CA010984
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 185339
dbSNP Id: rs150630090
gnomAD v2: 7-6022455-G-A
gnomAD v3: 7-5982824-G-A
gnomAD v4: 7-5982824-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5982824G>A , CM000669.2:g.5982824G>A GRCh38
NC_000007.13:g.6022455G>A , CM000669.1:g.6022455G>A GRCh37
NC_000007.12:g.5988981G>A NCBI36
NG_008466.1:g.31283C>T , LRG_161:g.31283C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1570C>T ENSP00000514615.2:n.*1570C>T
ENST00000699840.2:c.2171C>T ENSP00000514638.2:p.Ala724Val
ENST00000699930.2:c.2066C>T ENSP00000514695.2:p.Ala689Val
ENST00000406569.8:c.1678+4263C>T ENSP00000514464.1:n.1678+4263C>T
ENST00000644110.2:c.*1768C>T ENSP00000496392.2:n.*1768C>T
ENST00000699752.1:c.2018C>T ENSP00000514561.1:p.Ala673Val
ENST00000699753.1:c.*1595C>T ENSP00000514562.1:n.*1595C>T
ENST00000699754.1:c.1976C>T ENSP00000514563.1:p.Ala659Val
ENST00000699755.1:c.*1573C>T ENSP00000514564.1:n.*1573C>T
ENST00000699756.1:c.*1761C>T ENSP00000514565.1:n.*1761C>T
ENST00000699757.1:c.*1431C>T ENSP00000514566.1:n.*1431C>T
ENST00000699758.1:c.*1431C>T ENSP00000514567.1:n.*1431C>T
ENST00000699759.1:n.3028C>T
ENST00000699760.1:c.1856C>T ENSP00000514568.1:p.Ala619Val
ENST00000699761.1:c.1769C>T ENSP00000514569.1:p.Ala590Val
ENST00000699762.1:c.1601C>T ENSP00000514570.1:p.Ala534Val
ENST00000699763.1:c.*1264C>T ENSP00000514571.1:n.*1264C>T
ENST00000699764.1:c.*492C>T ENSP00000514572.1:n.*492C>T
ENST00000699765.1:c.*1270C>T ENSP00000514573.1:n.*1270C>T
ENST00000699766.1:c.2174C>T ENSP00000514574.1:p.Ala725Val
ENST00000699767.1:c.2174C>T ENSP00000514575.1:p.Ala725Val
ENST00000699768.1:c.2174C>T ENSP00000514576.1:p.Ala725Val
ENST00000699811.1:c.1769C>T ENSP00000514614.1:p.Ala590Val
ENST00000699813.1:n.2287C>T
ENST00000699814.1:c.1797C>T
ENST00000699815.1:c.*1705C>T ENSP00000514616.1:n.*1705C>T
ENST00000699816.1:c.*1064C>T ENSP00000514617.1:n.*1064C>T
ENST00000699817.1:c.*1768C>T ENSP00000514618.1:n.*1768C>T
ENST00000699818.1:c.1769C>T ENSP00000514619.1:p.Ala590Val
ENST00000699819.1:c.*1331C>T ENSP00000514620.1:n.*1331C>T
ENST00000699820.1:c.*112C>T ENSP00000514621.1:n.*112C>T
ENST00000699821.1:c.1769C>T ENSP00000514622.1:p.Ala590Val
ENST00000699822.1:c.*1626C>T ENSP00000514623.1:n.*1626C>T
ENST00000699823.1:c.1769C>T ENSP00000514624.1:p.Ala590Val
ENST00000699824.1:c.*1677C>T ENSP00000514625.1:n.*1677C>T
ENST00000699825.1:c.1613C>T ENSP00000514626.1:p.Ala538Val
ENST00000699826.1:c.*1573C>T ENSP00000514627.1:n.*1573C>T
ENST00000699827.1:c.2006C>T ENSP00000514628.1:p.Ala669Val
ENST00000699828.1:c.*1264C>T ENSP00000514629.1:n.*1264C>T
ENST00000699833.1:n.3946C>T
ENST00000699837.1:c.1769C>T ENSP00000514635.1:p.Ala590Val
ENST00000699838.1:c.*2074C>T ENSP00000514636.1:n.*2074C>T
ENST00000699839.1:c.2360C>T ENSP00000514637.1:p.Ala787Val
ENST00000699916.1:c.*1431C>T ENSP00000514684.1:n.*1431C>T
ENST00000699917.1:c.*1623C>T ENSP00000514685.1:n.*1623C>T
ENST00000699918.1:c.*1675C>T ENSP00000514686.1:n.*1675C>T
ENST00000699919.1:c.*1761C>T ENSP00000514687.1:n.*1761C>T
ENST00000699920.1:c.*1810C>T ENSP00000514688.1:n.*1810C>T
ENST00000699928.1:c.*112C>T ENSP00000514693.1:n.*112C>T
ENST00000699951.1:c.*1270C>T ENSP00000514706.1:n.*1270C>T
ENST00000699952.1:c.804-9282C>T ENSP00000514707.1:n.804-9282C>T
ENST00000265849.12:c.2174C>T MANE Select ENSP00000265849.7:p.Ala725Val
ENST00000642292.1:c.1769C>T ENSP00000495524.1:p.Ala590Val
ENST00000642456.1:c.1769C>T ENSP00000493814.1:p.Ala590Val
ENST00000643595.1:c.*1573C>T ENSP00000494497.1:n.*1573C>T
ENST00000644110.1:c.1856C>T ENSP00000496392.1:p.Ala619Val
ENST00000265849.11:c.2174C>T ENSP00000265849.7:p.Ala725Val
ENST00000382321.5:c.971C>T ENSP00000371758.4:p.Ala324Val
ENST00000406569.7:n.1678+4263C>T
ENST00000441476.6:c.1856C>T ENSP00000392843.2:p.Ala619Val
NM_000535.5:c.2174C>T , LRG_161t1:c.2174C>T NP_000526.1:p.Ala725Val
NR_003085.2:n.2256C>T
XM_006715742.2:c.2168C>T XP_006715805.1:p.Ala723Val
XM_006715744.2:c.1241C>T XP_006715807.1:p.Ala414Val
XM_011515427.1:c.2219C>T XP_011513729.1:p.Ala740Val
XM_011515428.1:c.2063C>T XP_011513730.1:p.Ala688Val
XM_011515429.1:c.1856C>T XP_011513731.1:p.Ala619Val
XM_011515430.1:c.1856C>T XP_011513732.1:p.Ala619Val
NM_000535.6:c.2174C>T NP_000526.2:p.Ala725Val
NM_001322003.1:c.1769C>T NP_001308932.1:p.Ala590Val
NM_001322004.1:c.1769C>T NP_001308933.1:p.Ala590Val
NM_001322005.1:c.1769C>T NP_001308934.1:p.Ala590Val
NM_001322006.1:c.2018C>T NP_001308935.1:p.Ala673Val
NM_001322007.1:c.1856C>T NP_001308936.1:p.Ala619Val
NM_001322008.1:c.1856C>T NP_001308937.1:p.Ala619Val
NM_001322009.1:c.1769C>T NP_001308938.1:p.Ala590Val
NM_001322010.1:c.1613C>T NP_001308939.1:p.Ala538Val
NM_001322011.1:c.1241C>T NP_001308940.1:p.Ala414Val
NM_001322012.1:c.1241C>T NP_001308941.1:p.Ala414Val
NM_001322013.1:c.1601C>T NP_001308942.1:p.Ala534Val
NM_001322014.1:c.2174C>T NP_001308943.1:p.Ala725Val
NM_001322015.1:c.1865C>T NP_001308944.1:p.Ala622Val
NR_136154.1:n.2261C>T
XM_006715744.4:c.1241C>T XP_006715807.1:p.Ala414Val
XM_017012342.2:c.1241C>T XP_016867831.1:p.Ala414Val
XM_024446800.1:c.1613C>T XP_024302568.1:p.Ala538Val
NM_000535.7:c.2174C>T MANE Select NP_000526.2:p.Ala725Val
NM_001322003.2:c.1769C>T NP_001308932.1:p.Ala590Val
NM_001322004.2:c.1769C>T NP_001308933.1:p.Ala590Val
NM_001322005.2:c.1769C>T NP_001308934.1:p.Ala590Val
NM_001322006.2:c.2018C>T NP_001308935.1:p.Ala673Val
NM_001322008.2:c.1856C>T NP_001308937.1:p.Ala619Val
NM_001322009.2:c.1769C>T NP_001308938.1:p.Ala590Val
NM_001322010.2:c.1613C>T NP_001308939.1:p.Ala538Val
NM_001322011.2:c.1241C>T NP_001308940.1:p.Ala414Val
NM_001322012.2:c.1241C>T NP_001308941.1:p.Ala414Val
NM_001322013.2:c.1601C>T NP_001308942.1:p.Ala534Val
NM_001322014.2:c.2174C>T NP_001308943.1:p.Ala725Val
NM_001322015.2:c.1865C>T NP_001308944.1:p.Ala622Val
NM_001322007.2:c.1856C>T NP_001308936.1:p.Ala619Val