Canonical Allele Identifier: CA009651
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 135937
dbSNP Id: rs373114291
gnomAD v2: 7-6026976-C-A
gnomAD v3: 7-5987345-C-A
gnomAD v4: 7-5987345-C-A

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987345C>A , CM000669.2:g.5987345C>A GRCh38
NC_000007.13:g.6026976C>A , CM000669.1:g.6026976C>A GRCh37
NC_000007.12:g.5993502C>A NCBI36
NG_008466.1:g.26762G>T , LRG_161:g.26762G>T

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*816G>T ENSP00000514615.2:n.*816G>T
ENST00000699840.2:c.1417G>T ENSP00000514638.2:p.Ala473Ser
ENST00000699930.2:c.1312G>T ENSP00000514695.2:p.Ala438Ser
ENST00000406569.8:c.1420G>T ENSP00000514464.1:p.Ala474Ser
ENST00000644110.2:c.*1014G>T ENSP00000496392.2:n.*1014G>T
ENST00000699752.1:c.1264G>T ENSP00000514561.1:p.Ala422Ser
ENST00000699753.1:c.*841G>T ENSP00000514562.1:n.*841G>T
ENST00000699754.1:c.1222G>T ENSP00000514563.1:p.Ala408Ser
ENST00000699755.1:c.*819G>T ENSP00000514564.1:n.*819G>T
ENST00000699756.1:c.*1007G>T ENSP00000514565.1:n.*1007G>T
ENST00000699757.1:c.*677G>T ENSP00000514566.1:n.*677G>T
ENST00000699758.1:c.*677G>T ENSP00000514567.1:n.*677G>T
ENST00000699759.1:n.2274G>T
ENST00000699760.1:c.1102G>T ENSP00000514568.1:p.Ala368Ser
ENST00000699761.1:c.1015G>T ENSP00000514569.1:p.Ala339Ser
ENST00000699762.1:c.847G>T ENSP00000514570.1:p.Ala283Ser
ENST00000699763.1:c.*510G>T ENSP00000514571.1:n.*510G>T
ENST00000699764.1:c.1420G>T ENSP00000514572.1:p.Ala474Ser
ENST00000699765.1:c.*516G>T ENSP00000514573.1:n.*516G>T
ENST00000699766.1:c.1420G>T ENSP00000514574.1:p.Ala474Ser
ENST00000699767.1:c.1420G>T ENSP00000514575.1:p.Ala474Ser
ENST00000699768.1:c.1420G>T ENSP00000514576.1:p.Ala474Ser
ENST00000699811.1:c.1015G>T ENSP00000514614.1:p.Ala339Ser
ENST00000699813.1:n.1533G>T
ENST00000699814.1:c.1043G>T
ENST00000699815.1:c.*951G>T ENSP00000514616.1:n.*951G>T
ENST00000699816.1:c.*310G>T ENSP00000514617.1:n.*310G>T
ENST00000699817.1:c.*1014G>T ENSP00000514618.1:n.*1014G>T
ENST00000699818.1:c.1015G>T ENSP00000514619.1:p.Ala339Ser
ENST00000699819.1:c.*577G>T ENSP00000514620.1:n.*577G>T
ENST00000699820.1:c.1144+2455G>T ENSP00000514621.1:n.1144+2455G>T
ENST00000699821.1:c.1015G>T ENSP00000514622.1:p.Ala339Ser
ENST00000699822.1:c.*872G>T ENSP00000514623.1:n.*872G>T
ENST00000699823.1:c.1015G>T ENSP00000514624.1:p.Ala339Ser
ENST00000699824.1:c.*923G>T ENSP00000514625.1:n.*923G>T
ENST00000699825.1:c.859G>T ENSP00000514626.1:p.Ala287Ser
ENST00000699826.1:c.*819G>T ENSP00000514627.1:n.*819G>T
ENST00000699827.1:c.1252G>T ENSP00000514628.1:p.Ala418Ser
ENST00000699828.1:c.*510G>T ENSP00000514629.1:n.*510G>T
ENST00000699833.1:n.3192G>T
ENST00000699837.1:c.1015G>T ENSP00000514635.1:p.Ala339Ser
ENST00000699838.1:c.*1320G>T ENSP00000514636.1:n.*1320G>T
ENST00000699839.1:c.1606G>T ENSP00000514637.1:p.Ala536Ser
ENST00000699916.1:c.*677G>T ENSP00000514684.1:n.*677G>T
ENST00000699917.1:c.*869G>T ENSP00000514685.1:n.*869G>T
ENST00000699918.1:c.*921G>T ENSP00000514686.1:n.*921G>T
ENST00000699919.1:c.*1007G>T ENSP00000514687.1:n.*1007G>T
ENST00000699920.1:c.*1056G>T ENSP00000514688.1:n.*1056G>T
ENST00000699928.1:c.989-4354G>T ENSP00000514693.1:n.989-4354G>T
ENST00000699929.1:c.*721G>T ENSP00000514694.1:n.*721G>T
ENST00000699930.1:c.1312G>T ENSP00000514695.1:p.Ala438Ser
ENST00000699931.1:n.2848G>T
ENST00000699951.1:c.*516G>T ENSP00000514706.1:n.*516G>T
ENST00000699952.1:c.803+9981G>T ENSP00000514707.1:n.803+9981G>T
ENST00000699953.1:c.*527G>T ENSP00000514708.1:n.*527G>T
ENST00000699954.1:c.*721G>T ENSP00000514709.1:n.*721G>T
ENST00000265849.12:c.1420G>T MANE Select ENSP00000265849.7:p.Ala474Ser
ENST00000642292.1:c.1015G>T ENSP00000495524.1:p.Ala339Ser
ENST00000642456.1:c.1015G>T ENSP00000493814.1:p.Ala339Ser
ENST00000643595.1:c.*819G>T ENSP00000494497.1:n.*819G>T
ENST00000644110.1:c.1102G>T ENSP00000496392.1:p.Ala368Ser
ENST00000265849.11:c.1420G>T ENSP00000265849.7:p.Ala474Ser
ENST00000382321.5:c.804-4354G>T ENSP00000371758.4:n.804-4354G>T
ENST00000406569.7:n.1420G>T
ENST00000441476.6:c.1102G>T ENSP00000392843.2:p.Ala368Ser
ENST00000469652.1:n.63-4440G>T
NM_000535.5:c.1420G>T , LRG_161t1:c.1420G>T NP_000526.1:p.Ala474Ser
NR_003085.2:n.1502G>T
XM_006715742.2:c.1414G>T XP_006715805.1:p.Ala472Ser
XM_006715744.2:c.487G>T XP_006715807.1:p.Ala163Ser
XM_011515427.1:c.1465G>T XP_011513729.1:p.Ala489Ser
XM_011515428.1:c.1309G>T XP_011513730.1:p.Ala437Ser
XM_011515429.1:c.1102G>T XP_011513731.1:p.Ala368Ser
XM_011515430.1:c.1102G>T XP_011513732.1:p.Ala368Ser
NM_000535.6:c.1420G>T NP_000526.2:p.Ala474Ser
NM_001322003.1:c.1015G>T NP_001308932.1:p.Ala339Ser
NM_001322004.1:c.1015G>T NP_001308933.1:p.Ala339Ser
NM_001322005.1:c.1015G>T NP_001308934.1:p.Ala339Ser
NM_001322006.1:c.1264G>T NP_001308935.1:p.Ala422Ser
NM_001322007.1:c.1102G>T NP_001308936.1:p.Ala368Ser
NM_001322008.1:c.1102G>T NP_001308937.1:p.Ala368Ser
NM_001322009.1:c.1015G>T NP_001308938.1:p.Ala339Ser
NM_001322010.1:c.859G>T NP_001308939.1:p.Ala287Ser
NM_001322011.1:c.487G>T NP_001308940.1:p.Ala163Ser
NM_001322012.1:c.487G>T NP_001308941.1:p.Ala163Ser
NM_001322013.1:c.847G>T NP_001308942.1:p.Ala283Ser
NM_001322014.1:c.1420G>T NP_001308943.1:p.Ala474Ser
NM_001322015.1:c.1111G>T NP_001308944.1:p.Ala371Ser
NR_136154.1:n.1507G>T
XM_006715744.4:c.487G>T XP_006715807.1:p.Ala163Ser
XM_017012342.2:c.487G>T XP_016867831.1:p.Ala163Ser
XM_024446800.1:c.859G>T XP_024302568.1:p.Ala287Ser
NM_000535.7:c.1420G>T MANE Select NP_000526.2:p.Ala474Ser
NM_001322003.2:c.1015G>T NP_001308932.1:p.Ala339Ser
NM_001322004.2:c.1015G>T NP_001308933.1:p.Ala339Ser
NM_001322005.2:c.1015G>T NP_001308934.1:p.Ala339Ser
NM_001322006.2:c.1264G>T NP_001308935.1:p.Ala422Ser
NM_001322008.2:c.1102G>T NP_001308937.1:p.Ala368Ser
NM_001322009.2:c.1015G>T NP_001308938.1:p.Ala339Ser
NM_001322010.2:c.859G>T NP_001308939.1:p.Ala287Ser
NM_001322011.2:c.487G>T NP_001308940.1:p.Ala163Ser
NM_001322012.2:c.487G>T NP_001308941.1:p.Ala163Ser
NM_001322013.2:c.847G>T NP_001308942.1:p.Ala283Ser
NM_001322014.2:c.1420G>T NP_001308943.1:p.Ala474Ser
NM_001322015.2:c.1111G>T NP_001308944.1:p.Ala371Ser
NM_001322007.2:c.1102G>T NP_001308936.1:p.Ala368Ser