Canonical Allele Identifier: CA10603112
Gene: HPS5 HGNC NCBI

Linked Data

ClinVar Variation Id: 280536
dbSNP Id: rs886041723

Genomic Alleles

HGVS Genome Assembly
NC_000011.10:g.18283873_18283876del , CM000673.2:g.18283873_18283876del GRCh38
NC_000011.9:g.18305420_18305423del , CM000673.1:g.18305420_18305423del GRCh37
NC_000011.8:g.18261996_18261999del NCBI36
NG_008877.1:g.43301_43304del , LRG_586:g.43301_43304del

Transcript Alleles

HGVS Amino-acid change
ENST00000349215.8:c.2979_2982del MANE Select ENSP00000265967.5:p.Cys993TrpfsTer16
ENST00000349215.7:c.2979_2982del ENSP00000265967.5:p.Cys993TrpfsTer16
ENST00000352460.7:n.1256_1259del
ENST00000396253.7:c.2637_2640del ENSP00000379552.3:p.Cys879TrpfsTer16
ENST00000438420.6:c.2637_2640del ENSP00000399590.2:p.Cys879TrpfsTer16
ENST00000537258.1:c.300_303del ENSP00000437437.1:p.Cys100TrpfsTer16
ENST00000545561.1:n.1040_1043del
NM_007216.3:c.2637_2640del NP_009147.3:p.Cys879TrpfsTer16
NM_181507.1:c.2979_2982del , LRG_586t1:c.2979_2982del NP_852608.1:p.Cys993TrpfsTer16
NM_181508.1:c.2637_2640del NP_852609.1:p.Cys879TrpfsTer16
XM_011519862.1:c.2979_2982del XP_011518164.1:p.Cys993TrpfsTer16
XM_011519863.1:c.2979_2982del XP_011518165.1:p.Cys993TrpfsTer16
XM_011519864.1:c.2979_2982del XP_011518166.1:p.Cys993TrpfsTer16
XM_011519865.1:c.2868_2871del XP_011518167.1:p.Cys956TrpfsTer16
XM_011519866.1:c.2637_2640del XP_011518168.1:p.Cys879TrpfsTer16
XM_011519867.1:c.2637_2640del XP_011518169.1:p.Cys879TrpfsTer16
XM_011519868.1:c.2637_2640del XP_011518170.1:p.Cys879TrpfsTer16
XM_011519868.3:c.2637_2640del XP_011518170.1:p.Cys879TrpfsTer16
XM_017017149.1:c.2979_2982del XP_016872638.1:p.Cys993TrpfsTer16
XM_017017150.1:c.2979_2982del XP_016872639.1:p.Cys993TrpfsTer16
XM_017017151.2:c.2868_2871del XP_016872640.1:p.Cys956TrpfsTer16
XM_017017152.1:c.2868_2871del XP_016872641.1:p.Cys956TrpfsTer16
XM_017017153.2:c.2868_2871del XP_016872642.1:p.Cys956TrpfsTer16
XM_017017154.1:c.2637_2640del XP_016872643.1:p.Cys879TrpfsTer16
XR_001747750.1:n.3220+1472_3220+1475del
XR_001747751.1:n.3308_3311del
XR_001747752.1:n.2976+1472_2976+1475del
XR_001747753.1:n.3093+1472_3093+1475del
XR_001747754.2:n.2645_2648del
XR_001747755.2:n.2567_2570del
XR_001747756.2:n.2640_2643del
NM_007216.4:c.2637_2640del NP_009147.3:p.Cys879TrpfsTer16
NM_181507.2:c.2979_2982del MANE Select NP_852608.1:p.Cys993TrpfsTer16