Canonical Allele Identifier: CA263636
Gene: CLN3 HGNC NCBI

Linked Data

ClinVar Variation Id: 56256
ClinVar RCV Id: RCV000049668
dbSNP Id: rs386833707

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.28477564del , CM000678.2:g.28477564del GRCh38
NC_000016.9:g.28488885del , CM000678.1:g.28488885del GRCh37
NC_000016.8:g.28396386del NCBI36
NG_008654.2:g.19742del , LRG_689:g.19742del

Transcript Alleles

HGVS Amino-acid change
ENST00000333496.14:c.1200del ENSP00000329171.9:p.Leu401SerfsTer?
ENST00000355477.10:c.1128del ENSP00000347660.7:p.Leu377SerfsTer?
ENST00000357857.14:c.1110del ENSP00000350523.9:p.Leu371SerfsTer?
ENST00000359984.12:c.1272del ENSP00000353073.9:p.Leu425SerfsTer?
ENST00000360019.8:c.1200del ENSP00000353116.3:p.Leu401SerfsTer?
ENST00000395653.9:c.813del ENSP00000379014.5:p.Leu272SerfsTer?
ENST00000561689.6:n.1685del
ENST00000564091.6:c.612del ENSP00000454466.2:p.Leu205SerfsTer?
ENST00000565316.6:c.1221del ENSP00000456117.1:p.Leu408SerfsTer?
ENST00000567963.6:c.1110del ENSP00000455387.2:p.Leu371SerfsTer?
ENST00000568076.6:n.1701del
ENST00000568422.6:c.*509del ENSP00000455549.2:n.*509del
ENST00000568452.6:n.1503del
ENST00000569430.7:c.1272del ENSP00000454229.1:p.Leu425SerfsTer?
ENST00000628023.3:c.*568del ENSP00000486178.1:n.*568del
ENST00000635861.1:c.*924del ENSP00000490034.1:n.*924del
ENST00000635887.1:c.1272del ENSP00000490709.1:p.Leu425SerfsTer?
ENST00000635958.1:n.1679del
ENST00000636017.1:c.*796del ENSP00000490538.1:n.*796del
ENST00000636078.1:n.1394del
ENST00000636147.2:c.1272del MANE Select ENSP00000490105.1:p.Leu425SerfsTer?
ENST00000636172.1:c.*796del ENSP00000490505.1:n.*796del
ENST00000636228.1:c.966del ENSP00000489627.1:p.Leu323SerfsTer?
ENST00000636351.1:n.1166del
ENST00000636503.1:c.*302del ENSP00000489824.1:n.*302del
ENST00000636766.1:c.1272del ENSP00000489841.1:p.Leu425SerfsTer?
ENST00000636839.1:n.1768del
ENST00000636853.1:n.2285del
ENST00000636866.1:c.*67del ENSP00000490880.1:n.*67del
ENST00000636907.1:n.1423del
ENST00000636977.1:n.2764del
ENST00000637050.1:n.1661del
ENST00000637100.1:c.1006-3299del ENSP00000490394.1:n.1006-3299del
ENST00000637107.1:c.*796del ENSP00000490248.1:n.*796del
ENST00000637184.1:c.*302del ENSP00000489952.1:n.*302del
ENST00000637299.1:c.*1081del ENSP00000489823.1:n.*1081del
ENST00000637376.1:c.*302del ENSP00000490758.1:n.*302del
ENST00000637378.1:c.228+4544del ENSP00000490831.1:n.228+4544del
ENST00000637578.1:c.*796del ENSP00000490206.1:n.*796del
ENST00000637699.1:c.1183del ENSP00000490049.1:n.1183del
ENST00000637745.1:c.709del
ENST00000637871.1:c.*970del ENSP00000490670.1:n.*970del
ENST00000638036.1:c.434del
ENST00000333496.13:c.1200del ENSP00000329171.9:p.Leu401SerfsTer?
ENST00000355477.9:c.*509del ENSP00000347660.6:n.*509del
ENST00000357806.11:c.975del ENSP00000350457.7:p.Leu326SerfsTer?
ENST00000357857.13:c.1110del ENSP00000350523.9:p.Leu371SerfsTer?
ENST00000359984.11:c.966del ENSP00000353073.8:p.Leu323SerfsTer?
ENST00000360019.6:c.1272del ENSP00000353116.2:p.Leu425SerfsTer?
ENST00000395653.8:c.972del ENSP00000379014.4:p.Leu325SerfsTer?
ENST00000561689.5:n.1241del
ENST00000563874.5:n.2800del
ENST00000564091.5:c.361del
ENST00000565140.5:c.1180del ENSP00000455342.1:n.1180del
ENST00000565316.5:c.1221del ENSP00000456117.1:p.Leu408SerfsTer?
ENST00000565354.5:n.585del
ENST00000566057.5:c.886del ENSP00000456693.1:n.886del
ENST00000567963.5:c.981del ENSP00000455387.1:p.Leu328SerfsTer?
ENST00000568076.5:n.1183del
ENST00000568224.4:c.1038del ENSP00000454253.1:p.Leu347SerfsTer?
ENST00000568422.5:c.*509del ENSP00000455549.1:n.*509del
ENST00000568452.5:n.1400del
ENST00000569030.5:c.1064del ENSP00000454680.1:n.1064del
ENST00000569430.5:c.1272del ENSP00000454229.1:p.Leu425SerfsTer?
ENST00000628023.2:c.*568del ENSP00000486178.1:n.*568del
ENST00000631023.2:c.981del ENSP00000486616.1:p.Leu328SerfsTer?
NM_000086.2:c.1272del , LRG_689t1:c.1272del NP_000077.1:p.Leu425SerfsTer?
NM_001042432.1:c.1272del , LRG_689t2:c.1272del NP_001035897.1:p.Leu425SerfsTer?
NM_001286104.1:c.1200del NP_001273033.1:p.Leu401SerfsTer?
NM_001286105.1:c.972del NP_001273034.1:p.Leu325SerfsTer?
NM_001286109.1:c.1038del NP_001273038.1:p.Leu347SerfsTer?
NM_001286110.1:c.1110del NP_001273039.1:p.Leu371SerfsTer?
NM_001042432.2:c.1272del MANE Select NP_001035897.1:p.Leu425SerfsTer?
NM_001286104.2:c.1200del NP_001273033.1:p.Leu401SerfsTer?
NM_001286105.2:c.972del NP_001273034.1:p.Leu325SerfsTer?
NM_001286109.2:c.1038del NP_001273038.1:p.Leu347SerfsTer?
NM_001286110.2:c.1110del NP_001273039.1:p.Leu371SerfsTer?