Canonical Allele Identifier: CA16618502
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 421758
dbSNP Id: rs1064795345

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987075_5987081del , CM000669.2:g.5987075_5987081del GRCh38
NC_000007.13:g.6026706_6026712del , CM000669.1:g.6026706_6026712del GRCh37
NC_000007.12:g.5993232_5993238del NCBI36
NG_008466.1:g.27029_27035del , LRG_161:g.27029_27035del

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1083_*1089del ENSP00000514615.2:n.*1083_*1089del
ENST00000699840.2:c.1684_1690del ENSP00000514638.2:p.Arg562CysfsTer30
ENST00000699930.2:c.1579_1585del ENSP00000514695.2:p.Arg527CysfsTer30
ENST00000406569.8:c.1678+9_1678+15del ENSP00000514464.1:n.1678+9_1678+15del
ENST00000644110.2:c.*1281_*1287del ENSP00000496392.2:n.*1281_*1287del
ENST00000699752.1:c.1531_1537del ENSP00000514561.1:p.Arg511CysfsTer30
ENST00000699753.1:c.*1108_*1114del ENSP00000514562.1:n.*1108_*1114del
ENST00000699754.1:c.1489_1495del ENSP00000514563.1:p.Arg497CysfsTer30
ENST00000699755.1:c.*1086_*1092del ENSP00000514564.1:n.*1086_*1092del
ENST00000699756.1:c.*1274_*1280del ENSP00000514565.1:n.*1274_*1280del
ENST00000699757.1:c.*944_*950del ENSP00000514566.1:n.*944_*950del
ENST00000699758.1:c.*944_*950del ENSP00000514567.1:n.*944_*950del
ENST00000699759.1:n.2541_2547del
ENST00000699760.1:c.1369_1375del ENSP00000514568.1:p.Arg457CysfsTer30
ENST00000699761.1:c.1282_1288del ENSP00000514569.1:p.Arg428CysfsTer30
ENST00000699762.1:c.1114_1120del ENSP00000514570.1:p.Arg372CysfsTer30
ENST00000699763.1:c.*777_*783del ENSP00000514571.1:n.*777_*783del
ENST00000699764.1:c.*5_*11del ENSP00000514572.1:n.*5_*11del
ENST00000699765.1:c.*783_*789del ENSP00000514573.1:n.*783_*789del
ENST00000699766.1:c.1687_1693del ENSP00000514574.1:p.Arg563CysfsTer30
ENST00000699767.1:c.1687_1693del ENSP00000514575.1:p.Arg563CysfsTer30
ENST00000699768.1:c.1687_1693del ENSP00000514576.1:p.Arg563CysfsTer30
ENST00000699811.1:c.1282_1288del ENSP00000514614.1:p.Arg428CysfsTer30
ENST00000699813.1:n.1800_1806del
ENST00000699814.1:c.1310_1316del
ENST00000699815.1:c.*1218_*1224del ENSP00000514616.1:n.*1218_*1224del
ENST00000699816.1:c.*577_*583del ENSP00000514617.1:n.*577_*583del
ENST00000699817.1:c.*1281_*1287del ENSP00000514618.1:n.*1281_*1287del
ENST00000699818.1:c.1282_1288del ENSP00000514619.1:p.Arg428CysfsTer30
ENST00000699819.1:c.*844_*850del ENSP00000514620.1:n.*844_*850del
ENST00000699820.1:c.1144+2722_1144+2728del ENSP00000514621.1:n.1144+2722_1144+2728de...
ENST00000699821.1:c.1282_1288del ENSP00000514622.1:p.Arg428CysfsTer30
ENST00000699822.1:c.*1139_*1145del ENSP00000514623.1:n.*1139_*1145del
ENST00000699823.1:c.1282_1288del ENSP00000514624.1:p.Arg428CysfsTer30
ENST00000699824.1:c.*1190_*1196del ENSP00000514625.1:n.*1190_*1196del
ENST00000699825.1:c.1126_1132del ENSP00000514626.1:p.Arg376CysfsTer30
ENST00000699826.1:c.*1086_*1092del ENSP00000514627.1:n.*1086_*1092del
ENST00000699827.1:c.1519_1525del ENSP00000514628.1:p.Arg507CysfsTer30
ENST00000699828.1:c.*777_*783del ENSP00000514629.1:n.*777_*783del
ENST00000699833.1:n.3459_3465del
ENST00000699837.1:c.1282_1288del ENSP00000514635.1:p.Arg428CysfsTer30
ENST00000699838.1:c.*1587_*1593del ENSP00000514636.1:n.*1587_*1593del
ENST00000699839.1:c.1873_1879del ENSP00000514637.1:p.Arg625CysfsTer30
ENST00000699916.1:c.*944_*950del ENSP00000514684.1:n.*944_*950del
ENST00000699917.1:c.*1136_*1142del ENSP00000514685.1:n.*1136_*1142del
ENST00000699918.1:c.*1188_*1194del ENSP00000514686.1:n.*1188_*1194del
ENST00000699919.1:c.*1274_*1280del ENSP00000514687.1:n.*1274_*1280del
ENST00000699920.1:c.*1323_*1329del ENSP00000514688.1:n.*1323_*1329del
ENST00000699928.1:c.989-4087_989-4081del ENSP00000514693.1:n.989-4087_989-4081del
ENST00000699929.1:c.*988_*994del ENSP00000514694.1:n.*988_*994del
ENST00000699930.1:c.1579_1585del ENSP00000514695.1:p.Arg527CysfsTer30
ENST00000699931.1:n.3115_3121del
ENST00000699951.1:c.*783_*789del ENSP00000514706.1:n.*783_*789del
ENST00000699952.1:c.803+10248_803+10254del ENSP00000514707.1:n.803+10248_803+10254de...
ENST00000699953.1:c.*794_*800del ENSP00000514708.1:n.*794_*800del
ENST00000699954.1:c.*988_*994del ENSP00000514709.1:n.*988_*994del
ENST00000265849.12:c.1687_1693del MANE Select ENSP00000265849.7:p.Arg563CysfsTer30
ENST00000642292.1:c.1282_1288del ENSP00000495524.1:p.Arg428CysfsTer30
ENST00000642456.1:c.1282_1288del ENSP00000493814.1:p.Arg428CysfsTer30
ENST00000643595.1:c.*1086_*1092del ENSP00000494497.1:n.*1086_*1092del
ENST00000644110.1:c.1369_1375del ENSP00000496392.1:p.Arg457CysfsTer30
ENST00000265849.11:c.1687_1693del ENSP00000265849.7:p.Arg563CysfsTer30
ENST00000382321.5:c.804-4087_804-4081del ENSP00000371758.4:n.804-4087_804-4081del
ENST00000406569.7:n.1678+9_1678+15del
ENST00000441476.6:c.1369_1375del ENSP00000392843.2:p.Arg457CysfsTer30
ENST00000469652.1:n.63-4173_63-4167del
NM_000535.5:c.1687_1693del , LRG_161t1:c.1687_1693del NP_000526.1:p.Arg563CysfsTer30
NR_003085.2:n.1769_1775del
XM_006715742.2:c.1681_1687del XP_006715805.1:p.Arg561CysfsTer30
XM_006715744.2:c.754_760del XP_006715807.1:p.Arg252CysfsTer30
XM_011515427.1:c.1732_1738del XP_011513729.1:p.Arg578CysfsTer30
XM_011515428.1:c.1576_1582del XP_011513730.1:p.Arg526CysfsTer30
XM_011515429.1:c.1369_1375del XP_011513731.1:p.Arg457CysfsTer30
XM_011515430.1:c.1369_1375del XP_011513732.1:p.Arg457CysfsTer30
NM_000535.6:c.1687_1693del NP_000526.2:p.Arg563CysfsTer30
NM_001322003.1:c.1282_1288del NP_001308932.1:p.Arg428CysfsTer30
NM_001322004.1:c.1282_1288del NP_001308933.1:p.Arg428CysfsTer30
NM_001322005.1:c.1282_1288del NP_001308934.1:p.Arg428CysfsTer30
NM_001322006.1:c.1531_1537del NP_001308935.1:p.Arg511CysfsTer30
NM_001322007.1:c.1369_1375del NP_001308936.1:p.Arg457CysfsTer30
NM_001322008.1:c.1369_1375del NP_001308937.1:p.Arg457CysfsTer30
NM_001322009.1:c.1282_1288del NP_001308938.1:p.Arg428CysfsTer30
NM_001322010.1:c.1126_1132del NP_001308939.1:p.Arg376CysfsTer30
NM_001322011.1:c.754_760del NP_001308940.1:p.Arg252CysfsTer30
NM_001322012.1:c.754_760del NP_001308941.1:p.Arg252CysfsTer30
NM_001322013.1:c.1114_1120del NP_001308942.1:p.Arg372CysfsTer30
NM_001322014.1:c.1687_1693del NP_001308943.1:p.Arg563CysfsTer30
NM_001322015.1:c.1378_1384del NP_001308944.1:p.Arg460CysfsTer30
NR_136154.1:n.1774_1780del
XM_006715744.4:c.754_760del XP_006715807.1:p.Arg252CysfsTer30
XM_017012342.2:c.754_760del XP_016867831.1:p.Arg252CysfsTer30
XM_024446800.1:c.1126_1132del XP_024302568.1:p.Arg376CysfsTer30
NM_000535.7:c.1687_1693del MANE Select NP_000526.2:p.Arg563CysfsTer30
NM_001322003.2:c.1282_1288del NP_001308932.1:p.Arg428CysfsTer30
NM_001322004.2:c.1282_1288del NP_001308933.1:p.Arg428CysfsTer30
NM_001322005.2:c.1282_1288del NP_001308934.1:p.Arg428CysfsTer30
NM_001322006.2:c.1531_1537del NP_001308935.1:p.Arg511CysfsTer30
NM_001322008.2:c.1369_1375del NP_001308937.1:p.Arg457CysfsTer30
NM_001322009.2:c.1282_1288del NP_001308938.1:p.Arg428CysfsTer30
NM_001322010.2:c.1126_1132del NP_001308939.1:p.Arg376CysfsTer30
NM_001322011.2:c.754_760del NP_001308940.1:p.Arg252CysfsTer30
NM_001322012.2:c.754_760del NP_001308941.1:p.Arg252CysfsTer30
NM_001322013.2:c.1114_1120del NP_001308942.1:p.Arg372CysfsTer30
NM_001322014.2:c.1687_1693del NP_001308943.1:p.Arg563CysfsTer30
NM_001322015.2:c.1378_1384del NP_001308944.1:p.Arg460CysfsTer30
NM_001322007.2:c.1369_1375del NP_001308936.1:p.Arg457CysfsTer30