Canonical Allele Identifier: CA16616947
Gene: MSH5 HGNC NCBI
MSH5-SAPCD1 HGNC NCBI

Linked Data

ClinVar Variation Id: 417969
ClinVar RCV Id: RCV000477966
dbSNP Id: rs1060505055
gnomAD v4: 6-31759476-G-T

Genomic Alleles

HGVS Genome Assembly
NC_000006.12:g.31759476G>T , CM000668.2:g.31759476G>T GRCh38
NC_000006.11:g.31727253G>T , CM000668.1:g.31727253G>T GRCh37
NC_000006.10:g.31835232G>T NCBI36
NG_011611.1:g.24480G>T

Transcript Alleles

HGVS Amino-acid change
ENST00000375750.9:c.1459G>T (MSH5) MANE Select ENSP00000364903.3:p.Asp487Tyr
ENST00000375755.8:c.1459G>T (MSH5) ENSP00000364908.3:p.Asp487Tyr
ENST00000650702.1:n.1809G>T (MSH5)
ENST00000375703.7:c.1459G>T (MSH5) ENSP00000364855.3:p.Asp487Tyr
ENST00000375740.7:c.1510G>T (MSH5) ENSP00000364892.3:p.Asp504Tyr
ENST00000375750.7:c.1459G>T (MSH5) ENSP00000364903.3:p.Asp487Tyr
ENST00000375755.7:c.1459G>T (MSH5) ENSP00000364908.3:p.Asp487Tyr
ENST00000395853.5:c.481G>T (MSH5) ENSP00000379194.1:p.Asp161Tyr
ENST00000423982.6:c.1459G>T (MSH5) ENSP00000406352.2:p.Asp487Tyr
ENST00000450148.5:c.985G>T (MSH5) ENSP00000394971.1:p.Asp329Tyr
ENST00000463144.5:c.1146G>T (MSH5)
ENST00000467319.1:n.662G>T (MSH5)
ENST00000468136.5:n.665G>T (MSH5)
ENST00000493662.6:c.1510G>T (MSH5-SAPCD1) ENSP00000417871.2:p.Asp504Tyr
ENST00000498473.6:c.32G>T (MSH5-SAPCD1)
NM_002441.4:c.1459G>T (MSH5) NP_002432.1:p.Asp487Tyr
NM_025259.5:c.1510G>T (MSH5) NP_079535.4:p.Asp504Tyr
NM_172165.3:c.1459G>T (MSH5) NP_751897.1:p.Asp487Tyr
NM_172166.3:c.1459G>T (MSH5) NP_751898.1:p.Asp487Tyr
NR_037846.1:n.1638G>T (MSH5-SAPCD1)
NM_172166.4:c.1459G>T (MSH5) MANE Select NP_751898.1:p.Asp487Tyr
NM_002441.5:c.1459G>T (MSH5) NP_002432.1:p.Asp487Tyr
NM_025259.6:c.1510G>T (MSH5) NP_079535.4:p.Asp504Tyr
NM_172165.4:c.1459G>T (MSH5) NP_751897.1:p.Asp487Tyr